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    41 repositories

    • NDI-matlab

      Public
      NDI (Neuroscience Data Interface) is a cross-platform interface standard for reading neuroscience data and storing the results of analyses
      MATLAB
      •
      Other
      •9•13•39•1•Updated Nov 7, 2024Nov 7, 2024

    • vhlab-toolbox-matlab

      Public
      General purpose Matlab toolbox for neuroscience research created by Van Hooser lab and collaborators
      MATLAB
      •
      MIT License
      •9•8•1•0•Updated Oct 31, 2024Oct 31, 2024

    • NDR-matlab

      Public
      Neuroscience Data Readers - A Matlab conglomerative library for reading neuroscience data files
      MATLAB
      •1•1•4•0•Updated Oct 26, 2024Oct 26, 2024

    • DID-matlab

      Public
      Data Interface Database
      MATLAB
      •
      Other
      •1•1•10•1•Updated Oct 24, 2024Oct 24, 2024

    • NDIcalc-vis-matlab

      Public
      NDI calculator objects and documents for vision research
      MATLAB
      •
      Other
      •1•1•5•0•Updated Jul 31, 2024Jul 31, 2024

    • NDIcalc-visbayes-matlab

      Public
      NDI calculator objects and documents for vision research using Bayesian analysis
      MATLAB
      •
      Other
      •0•0•0•0•Updated Jul 7, 2024Jul 7, 2024

    • vhlab-TwoPhoton-matlab

      Public
      VH Lab tools for analysis of calcium imaging data
      MATLAB
      •
      MIT License
      •0•0•14•0•Updated Jun 4, 2024Jun 4, 2024

    • vhlab-publishedstudies

      Public
      Code for data analysis and figure generation from specific VH lab projects and collaborations
      MATLAB
      •
      MIT License
      •1•1•0•0•Updated Jun 2, 2024Jun 2, 2024

    • JRCLUST

      Public
      JRCLUST
      MATLAB
      •
      Apache License 2.0
      •22•0•0•0•Updated May 1, 2024May 1, 2024

    • vhlab-library-matlab

      Public
      VH Lab Matlab libraries; functions that manage and analyze VH lab experiments that are a less general than vhlab-toolbox-matlab
      MATLAB
      •
      MIT License
      •2•0•1•0•Updated Mar 24, 2024Mar 24, 2024

    • vhlab-microscopyimageanalysis-matlab

      Public
      Matlab app for analysis of high density imaging data like that from Array Tomography
      MATLAB
      •0•0•16•3•Updated Sep 19, 2023Sep 19, 2023

    • vhlab-parts

      Public
      Published parts (descriptions, 3D printing files, board schematics, etc) from VH Lab
      0•0•1•0•Updated Jul 6, 2023Jul 6, 2023

    • vhlab-NewStim-matlab

      Public
      A visual (and auditory) stimulus suite for Matlab that relies on Psychtoolbox
      MATLAB
      •
      MIT License
      •0•3•3•0•Updated Dec 16, 2022Dec 16, 2022

    • vhlab_vhtools

      Public
      Complete installation of the VH Lab tools for Neuroscience
      MATLAB
      •
      MIT License
      •2•1•1•0•Updated Sep 22, 2022Sep 22, 2022

    • Semi-Circle-Ferret-Microdrive

      Public
      Solidworks, STL files, and supplementary files/ papers for creating a microdrive with thomas electrodes
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Sep 9, 2022Sep 9, 2022

    • vhlab-NRSA-template

      Public
      NRSA template organization for VH lab
      0•0•0•0•Updated Jun 18, 2022Jun 18, 2022

    • Microdrive-Array

      Public
      Microdrive array 3D CAD files
      G-code
      •0•0•0•0•Updated Apr 26, 2022Apr 26, 2022

    • vhlab-thirdparty-matlab

      Public
      A distribution of 3rd party open source software tools that is used by VH Lab
      MATLAB
      •
      MIT License
      •0•1•0•0•Updated Mar 16, 2022Mar 16, 2022

    • applibtools-matlab

      Public
      A Matlab package to manage applications and libraries
      MATLAB
      •
      MIT License
      •0•0•3•0•Updated Feb 8, 2022Feb 8, 2022

    • vhlab-ffei-matlab

      Public
      Code to simulate paired feed-forward excitatory and inhibitory inputs to neurons and circuits
      MATLAB
      •0•0•0•0•Updated Jan 31, 2022Jan 31, 2022

    • vhlab-RunExperiment-matlab

      Public
      A system for running and performing analysis for visual physiology experiments (visual stimulation, electrophysiology, 2-photon imaging)
      MATLAB
      •
      MIT License
      •1•2•3•0•Updated Nov 19, 2021Nov 19, 2021

    • vhlab-Spike2Scripts-Spike2

      Public
      Scripts written for the Cambridge Electronic Design Spike2 system that are used in VH lab
      PLSQL
      •
      MIT License
      •0•0•0•0•Updated Nov 19, 2021Nov 19, 2021

    • vhlab-grading-matlab

      Public
      Small programs / apps for grading
      MATLAB
      •0•0•12•0•Updated Oct 12, 2021Oct 12, 2021

    • vhlab-AnimalMonitor-matlab

      Public
      A simple Matlab program for displaying vital signs (EKG, EEG)
      MATLAB
      •
      MIT License
      •3•3•0•0•Updated May 6, 2021May 6, 2021

    • Test2

      Public
      MATLAB
      •1•0•0•0•Updated Mar 15, 2021Mar 15, 2021

    • hlab-carbonfiber

      Public
      Carbon fiber electrode parts
      0•0•0•0•Updated Jan 8, 2021Jan 8, 2021

    • neuroscienceexperimentalmetadata

      Public
      A proposed set of neuroscience metadata with public discussion
      1•0•6•0•Updated Dec 2, 2020Dec 2, 2020

    • xolotl

      Public
      The nicest neuron simulator out there. Very fast (written in C++). Flexible (fully object oriented). Immediate (live manipulation in MATLAB). Comes with a powerful parameter optimizer. Get started ➡️
      C++
      •
      GNU General Public License v3.0
      •8•0•0•0•Updated Nov 2, 2020Nov 2, 2020

    • NIF-Ontology

      Public
      NIF Standard Ontologies (NIFSTD)
      Creative Commons Attribution 4.0 International
      •17•0•0•0•Updated Aug 16, 2020Aug 16, 2020

    • SRNeuronAnalysis

      Public
      pyramidal neuron analysis code
      Python
      •0•0•1•0•Updated Sep 2, 2019Sep 2, 2019