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@dna-seq DNA-Seq

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    30 repositories

    • dna-seq

      Public
      DNA-Seq pipeline
      Jupyter Notebook
      •
      Apache License 2.0
      •11•27•0•0•Updated Dec 19, 2024Dec 19, 2024

    • dna-seq.github.io

      Public
      Static site of Just-DNA seq project
      HTML
      •0•0•0•0•Updated Nov 16, 2024Nov 16, 2024

    • just_superhuman

      Public
      Postaggregator of superhumangenes module of Oakvar
      HTML
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Nov 13, 2024Nov 13, 2024

    • just_pathogenic

      Public
      Oakvar module to find pathogenic SNP in human genome.
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • quick-dna

      Public
      GNU Affero General Public License v3.0
      •2•1•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_cancer

      Public
      Cancer postagregator for longevity reporter
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_cardio

      Public
      cardio ostagragator for longevity report
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_longevitymap

      Public
      Longevity map postagregator for longevity report in oakvar.
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_coronary

      Public
      Coronary disease postagregator for longevity report in oakvar.
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_prs

      Public
      Polygenic risk score (PRS) postagregator for longevity report in oakvar
      Python
      •
      GNU Affero General Public License v3.0
      •0•4•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_thrombophilia

      Public
      Thrombophilia risks postaggregator for longevity report
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_vo2max

      Public
      VO2 max postagregator for longevity report in oakvar
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_drugs

      Public
      Drugs postagregator for longevity reporter in oakvar.
      Python
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • longevity2reporter

      Public
      HTML
      •
      GNU Affero General Public License v3.0
      •1•4•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just_lipidmetabolism

      Public
      Lipid metabolism postaggregator for longevity report
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • superhumanreporter

      Public
      Reporter of superhumangenes module of Oakvar
      HTML
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just-dna-module

      Public
      Basic classes for Just-DNA-Seq modules
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • just-dna-seq

      Public
      Just-DNA-Seq documentation
      Python
      •0•6•2•0•Updated Oct 28, 2024Oct 28, 2024

    • ukbiobank

      Public
      Scripts for working with ukb platform
      Jupyter Notebook
      •0•0•0•0•Updated Jun 19, 2024Jun 19, 2024

    • oakvar-longevity

      Public
      OakVar longevity module
      genomicslongevity
      Python
      •
      GNU Affero General Public License v3.0
      •3•3•1•0•Updated Jul 26, 2023Jul 26, 2023

    • my_genes_and_longevity_comic

      Public
      A comic to promote longevity and Just-DNA-Seq project
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated May 22, 2023May 22, 2023

    • neural_networks

      Public
      Neural networks on longevity and ageing-associated diseases
      0•0•0•0•Updated May 21, 2023May 21, 2023

    • report_example

      Public
      An example of the report generated by Just-DNA-Seq module of Oakvar
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 25, 2023Mar 25, 2023

    • prs

      Public
      Scripts to run polygenic risk score
      Python
      •0•3•0•0•Updated Feb 25, 2023Feb 25, 2023

    • modules-preprocessing

      Public
      Repository with Notebooks that are used to preprocess data for Just-DNA-Seq modules
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Feb 19, 2023Feb 19, 2023

    • stroke_prs

      Public
      Python
      •0•0•0•0•Updated Jan 11, 2023Jan 11, 2023

    • longevity-map

      Public
      Code for the future version of longevity map
      TypeScript
      •1•0•0•0•Updated Nov 22, 2022Nov 22, 2022

    • longevity-annotator

      Public archive
      Annotator for genetic polymorphism associated with longevity
      Python
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Oct 20, 2022Oct 20, 2022

    • gero-drugs-module

      Public
      Code for gero-grugs module
      Python
      •1•0•0•0•Updated Oct 9, 2022Oct 9, 2022

    • containers

      Public
      Repository for useful containers
      Dockerfile
      •
      MIT License
      •0•0•0•0•Updated Oct 5, 2022Oct 5, 2022