Repositories list

• util-images

  Public
  Collection of container images

  Dockerfile

  •

  Apache License 2.0

  •1•0•1•10•Updated Dec 21, 2024Dec 21, 2024

• charts

  Public
  Repository for Helm Charts

  Go

  •

  Apache License 2.0

  •1•3•2•2•Updated Dec 21, 2024Dec 21, 2024

• pathling-s3-import

  Public
  Tool for importing ndjson files from object storage buckets to a Pathling server

  C#

  •

  Apache License 2.0

  •0•2•2•2•Updated Dec 21, 2024Dec 21, 2024

• recruit

  Public
  A Cloud-Native Clinical Trial Recruitment Support System based on HL7 FHIR® and the OMOP CDM

  kubernetesdocker-composemkdocs+ 6fhirclinical-trialsclinical-trial-management-systemomopomop-cdmhl7-fhir

  Java

  •

  GNU Affero General Public License v3.0

  •2•6•3•10•Updated Dec 20, 2024Dec 20, 2024

• .github

  Public
  Dockerfile

  •

  Apache License 2.0

  •0•0•1•3•Updated Dec 20, 2024Dec 20, 2024

• loinc-conversion

  Public
  REST service that converts LOINC codes and UCUM units to a standardized representation

  javascripthealthcareloinc+ 3harmonizationucumloinc-codes

  JavaScript

  •

  Apache License 2.0

  •0•3•1•3•Updated Dec 20, 2024Dec 20, 2024

• FHIR-Facade

  Public
  Python

  •1•4•2•1•Updated Dec 19, 2024Dec 19, 2024

• vfps

  Public
  A very fast and resource-efficient pseudonym service.

  grpcgrpc-json-transcodergrpc-dotnet+ 2pseudonympseudonymization

  C#

  •

  Apache License 2.0

  •0•4•1•11•Updated Dec 17, 2024Dec 17, 2024

• kafka-fhir-to-server

  Public
  Reads resources from an Apache Kafka topic and sends them to a FHIR server.

  kafkafhir

  Java

  •

  Apache License 2.0

  •2•5•3•1•Updated Dec 9, 2024Dec 9, 2024

• dqa-dqastats

  Public
  Automated Data Quality Assessment. (Mirror of UKER internal git)

  rdata-quality

  R

  •

  GNU General Public License v3.0

  •5•7•1•2•Updated Dec 6, 2024Dec 6, 2024

• fhir-pseudonymizer

  Public
  A REST service to pseudonymize and anonymize FHIR® resources.

  healthcarefhirhealth-informatics+ 2anonymizationpseudonymization

  C#

  •

  MIT License

  •2•17•3•0•Updated Dec 3, 2024Dec 3, 2024

• ig-build-tools

  Public
  A container image including useful tools for building FHIR IGs

  fhir

  Dockerfile

  •

  Apache License 2.0

  •0•0•1•1•Updated Dec 3, 2024Dec 3, 2024

• MIRACUM-Mapper-2.0-frontend

  Public
  Vue

  •

  Apache License 2.0

  •0•1•0•1•Updated Dec 2, 2024Dec 2, 2024

• MIRACUM-Mapper-2.0-backend

  Public
  Go

  •

  Apache License 2.0

  •0•2•1•1•Updated Dec 2, 2024Dec 2, 2024

• dqa-dqagui

  Public
  Mirror of UKER internal git

  R

  •

  GNU General Public License v3.0

  •2•2•0•1•Updated Nov 29, 2024Nov 29, 2024

• misc-dizutils

  Public
  Mirror of UKER internal git

  R

  •

  GNU General Public License v3.0

  •3•3•0•1•Updated Nov 27, 2024Nov 27, 2024

• calm-qe

  Public archive
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• fhir-gateway

  Public
  A thin layer between FHIR REST clients and resource processing pipelines.

  kafkafhirfhir-server+ 1fhir-api

  Java

  •

  Apache License 2.0

  •7•13•8•3•Updated Nov 8, 2024Nov 8, 2024

• kafka-fhir-serializer

  Public
  Kafka De-/Serializer for FHIR® resources in JSON format.

  javakafkafhir+ 1kafka-serializer

  Java

  •

  Apache License 2.0

  •0•3•2•0•Updated Nov 8, 2024Nov 8, 2024

• Miracum-Mapper

  Public
  Multi-user application for collaboratively creating mappings to medical terminologies, such as LOINC

  C#

  •

  GNU General Public License v3.0

  •0•1•0•1•Updated Nov 1, 2024Nov 1, 2024

• ahd2fhir

  Public
  A REST service for mapping text analysis results from Averbis Health Discovery to FHIR resources.

  Python

  •

  Apache License 2.0

  •0•8•10•1•Updated Oct 21, 2024Oct 21, 2024

• ohdsi-cohort-sync

  Public
  A tool for backing up OHDSI WebAPI cohorts in a git repository

  omophealth-informaticsohdsi-webapi+ 1omop-cdm

  Python

  •

  Apache License 2.0

  •0•0•1•1•Updated Oct 14, 2024Oct 14, 2024

• fhir-pseudonymization-operations-ig

  Public archive
  Demo FHIR® implementation guide for pseudonymization operations

  fhirpseudonymizationfhir-implementation-guide

  GLSL

  •

  Creative Commons Zero v1.0 Universal

  •0•1•1•3•Updated Oct 9, 2024Oct 9, 2024

• misc-diztools

  Public
  Set of useful functions for R (Mirror of UKER internal git)

  snippetsrtools

  R

  •

  GNU General Public License v3.0

  •2•3•0•1•Updated May 24, 2024May 24, 2024

• miracum.github.io

  Public
  HTML

  •0•0•0•1•Updated May 1, 2024May 1, 2024

• racoon-combine-fdpg-labexport

  Public
  Code for the extraction of lab values of the local DIZ to supply to the RACOON subproject COMBINE

  Python

  •0•1•0•0•Updated Feb 28, 2024Feb 28, 2024

• kafka-connect-images

  Public archive
  Collection of Apache Kafka® Connect images including relevant connector plugins

  kafkakafka-connect

  Dockerfile

  •

  Apache License 2.0

  •0•0•1•4•Updated Jan 23, 2024Jan 23, 2024

• labor-labvisualizer

  Public
  Mirror of UKER internal git

  R

  •

  GNU General Public License v3.0

  •1•1•0•1•Updated Dec 15, 2023Dec 15, 2023

• demo-kafka-spark-pipeline

  Public
  Jupyter Notebook

  •3•2•0•1•Updated Dec 15, 2023Dec 15, 2023

• simple-aiokafka

  Public
  Simple wrapper for the AIOKafka library using pydantic configuration parsing

  Python

  •

  Apache License 2.0

  •1•2•1•1•Updated Dec 15, 2023Dec 15, 2023