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Error in `ngmlr': double free or corruption (!prev): 0x00002aaed8eeb910 #92
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Thanks for reaching out. Are these HiFi reads or CLR reads? I am also a bit in the dark about what could have caused this. I assume memory availability wasn't an issue in this run? |
Fritz, It is HiFi reads. I am mapping to a draft genome, which has a number of small contigs. I am thinking this may be the cause. I am going to try to remove those smaller contigs and re-run the mapping. If this is the case, will let you know. |
Thanks Mike, |
Hi, did you found the solution? |
I am trying to run PacBio data against a mouse genome, and am seeing the following error
Error in 'ngmlr': double free or corruption (!prev): 0x00002aaed8eeb910
. I am running the alignment with a singularity container:quay.io-biocontainers-ngmlr-0.2.7--he513fc3_2.img
Here is the entire log of the crash:
Any ideas as to what causes this, or what I can check to debug?
Thanks.
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