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From the Boost 1.65 release notes:
http://www.boost.org/users/history/version_1_65_1.html
I found how to fix it from: https://github.com/mcs07/rdkit/blob/a5358f7744dae13731b28963b5c4c45983331dba/Code/RDBoost/boost_numpy.h
Building stuff for Gentoo pulls the latest Boost and so, this popped.