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if you use non-compressed fastq files as input then in the output files all samples have 0 reads and none of them, of course, pass QC. I believe, this is because gamtools count total number of lines in compressed fastq files and divide it to 4, so when the files are not compressed this results in an error
The text was updated successfully, but these errors were encountered:
if you use non-compressed fastq files as input then in the output files all samples have 0 reads and none of them, of course, pass QC. I believe, this is because gamtools count total number of lines in compressed fastq files and divide it to 4, so when the files are not compressed this results in an error
The text was updated successfully, but these errors were encountered: