Apptainer.2023.7

Bootstrap: docker
From: quay.io/qiime2/core:2023.7

%labels
Maintainer marty.hickman@plantandfood.co.nz
Version 2023.7

%post
  chmod 775 /home/qiime2/q2cli/cache/completion.sh

%runscript
if [ -x /opt/conda/envs/qiime2-2023.7/bin/$APPTAINER_NAME ]; then
    exec $APPTAINER_NAME "$@"
else
  /bin/echo -e "This Apptainer image cannot provide a single entrypoint. Please use \"apptainer exec $APPTAINER_NAME <cmd>\", where <cmd> is one of the following:\n"
  exec echo biom qiime
fi