DESCRIPTION

Package: pgxRpi
Title: R wrapper for Progenetix 
Version: 1.3.0
Authors@R: 
    c(person(given = "Hangjia",
           family = "Zhao",
           role = c("aut", "cre"),
           email = "hangjia.zhao@uzh.ch",
           comment = c(ORCID = "0000-0001-8376-5751")),
      person(given = "Michael",
           family = "Baudis",
           role = c("aut"),
           email = "michael.baudis@mls.uzh.ch",
           comment = c(ORCID = "0000-0002-9903-4248")))
Description: The package is an R wrapper for Progenetix REST API built upon the 
        Beacon v2 protocol. Its purpose is to provide a seamless way for retrieving genomic 
        data from Progenetix database—an open resource dedicated to curated oncogenomic 
        profiles. Empowered by this package, users can effortlessly access and visualize 
        data from Progenetix.
biocViews: CopyNumberVariation, GenomicVariation, DataImport, Software
License: Artistic-2.0
Encoding: UTF-8
LazyData: FALSE
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Imports:
    utils,
    methods,
    grDevices,
    graphics,
    circlize,
    httr,
    dplyr,
    attempt,
    lubridate,
    survival,
    survminer,
    ggplot2,
    GenomicRanges,
    SummarizedExperiment,
    S4Vectors,
    yaml,
    parallel,
    future,
    future.apply
Depends: 
    R (>= 4.2)
Suggests: 
    BiocStyle,
    rmarkdown,
    knitr,
    testthat
BugReports: https://github.com/progenetix/pgxRpi/issues
URL: https://github.com/progenetix/pgxRpi
VignetteBuilder: knitr