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1. inSilicoGenome inSilicoGenome Public

   A Python utility to create artificial genomes, this tool is designed to be used in bioinformatics benchmarking pipeline.

   Python

2. OshV-1-molepidemio OshV-1-molepidemio Public

   Code of the article that describes the molecular epidemiology analyses of OsHV-1 virus by whole genome sequencing approaches in French shellfish growing areas.

   Shell 1

3. Children_CoviDraw Children_CoviDraw Public

   HTML

4. DivOsHV-1 DivOsHV-1 Public

   Forked from IHPE/DivOsHV

   Shell

5. ngshmmalign ngshmmalign Public

   Forked from cbg-ethz/ngshmmalign

   ngshmmalign is a profile HMM aligner for NGS reads designed particularly for small genomes (such as those of RNA viruses like HIV-1 and HCV) that experience substantial biological insertions and de…

   C++

6. snakemake snakemake Public

   Forked from snakemake/snakemake

   This is the development home of the workflow management system Snakemake. For general information, see

   HTML