{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":603199728,"defaultBranch":"main","name":"Merizo","ownerLogin":"psipred","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-02-17T20:41:59.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/14292638?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1697234273.0","currentOid":""},"activityList":{"items":[{"before":"707fb6610193f9b43e0248d431b4a60f62cd918f","after":"fbb38be0941f92e30876b273e12a175289a0bc11","ref":"refs/heads/main","pushedAt":"2024-07-23T13:55:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"504a0ed62cb4db9dbbd9013685a964e85e5015f9","after":"707fb6610193f9b43e0248d431b4a60f62cd918f","ref":"refs/heads/main","pushedAt":"2024-07-23T13:53:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"Update requirements.txt","shortMessageHtmlLink":"Update requirements.txt"}},{"before":"8915e70e5e5223fbac5717076510ae6eb516713a","after":"504a0ed62cb4db9dbbd9013685a964e85e5015f9","ref":"refs/heads/main","pushedAt":"2024-07-03T12:28:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"added pdb chain select","shortMessageHtmlLink":"added pdb chain select"}},{"before":"1ea58842d98f3f54df63efc8ddb556caa1d44958","after":"8915e70e5e5223fbac5717076510ae6eb516713a","ref":"refs/heads/main","pushedAt":"2024-07-03T12:04:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"add header toggle to merizo","shortMessageHtmlLink":"add header toggle to merizo"}},{"before":"604f60ae16ea5d00ae38a218fda8fbfaddf68780","after":"1ea58842d98f3f54df63efc8ddb556caa1d44958","ref":"refs/heads/main","pushedAt":"2024-07-03T11:52:07.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"things","shortMessageHtmlLink":"things"}},{"before":"579f95fa1ff2dbe80a0bbd0232a211d4f4f969cf","after":"604f60ae16ea5d00ae38a218fda8fbfaddf68780","ref":"refs/heads/main","pushedAt":"2024-06-03T11:48:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"1a2d8aff124acc8b7ba10f4f6cb3a0bd8ab99e96","after":"579f95fa1ff2dbe80a0bbd0232a211d4f4f969cf","ref":"refs/heads/main","pushedAt":"2024-06-03T09:24:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"623dfa6f8a88931b08cc94a8f765b057322a2912","after":"1a2d8aff124acc8b7ba10f4f6cb3a0bd8ab99e96","ref":"refs/heads/main","pushedAt":"2024-04-17T15:49:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"Delete torch_requirements.txt","shortMessageHtmlLink":"Delete torch_requirements.txt"}},{"before":"1ebf44111c010384130234a1d35822ee503caa0b","after":"623dfa6f8a88931b08cc94a8f765b057322a2912","ref":"refs/heads/main","pushedAt":"2024-04-17T15:48:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"Update requirements.txt","shortMessageHtmlLink":"Update requirements.txt"}},{"before":"0ba30f85639ca6d9a145d0a872d734a8042f5d20","after":"1ebf44111c010384130234a1d35822ee503caa0b","ref":"refs/heads/main","pushedAt":"2024-04-17T14:08:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"Update requirements.txt\n\nTorch moved to its own requirements file so that it can be installed form the torch repo easily with ansible","shortMessageHtmlLink":"Update requirements.txt"}},{"before":"43f1189d3d06f705efbfb8d691d9f3573658b7ba","after":"0ba30f85639ca6d9a145d0a872d734a8042f5d20","ref":"refs/heads/main","pushedAt":"2024-04-17T14:07:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"Rename torch_requirements to torch_requirements.txt","shortMessageHtmlLink":"Rename torch_requirements to torch_requirements.txt"}},{"before":"64b8823d5a55882fea5783c14cb92d4011e27c2c","after":"43f1189d3d06f705efbfb8d691d9f3573658b7ba","ref":"refs/heads/main","pushedAt":"2024-04-17T14:06:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"Create torch_requirements","shortMessageHtmlLink":"Create torch_requirements"}},{"before":"c17574318c75cb2a779645551c45e0b980b8d3c1","after":"64b8823d5a55882fea5783c14cb92d4011e27c2c","ref":"refs/heads/main","pushedAt":"2024-03-10T19:07:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Delete examples/AF-Q9P273-F1-model_v4.pdb","shortMessageHtmlLink":"Delete examples/AF-Q9P273-F1-model_v4.pdb"}},{"before":"9bf0937fd4f420547fad80f9e5d6689afa35eae0","after":"c17574318c75cb2a779645551c45e0b980b8d3c1","ref":"refs/heads/main","pushedAt":"2024-03-03T00:57:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Significant refactoring of predict.py and a few other functions dotted around.","shortMessageHtmlLink":"Significant refactoring of predict.py and a few other functions dotte…"}},{"before":"791a4f92ff1d63402800338901d102c1b3861ad1","after":"9bf0937fd4f420547fad80f9e5d6689afa35eae0","ref":"refs/heads/main","pushedAt":"2024-02-28T11:31:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"change file name ending for domains","shortMessageHtmlLink":"change file name ending for domains"}},{"before":"a84817884e6f1183ad8bab36199039e7c5f16eab","after":"791a4f92ff1d63402800338901d102c1b3861ad1","ref":"refs/heads/main","pushedAt":"2024-02-16T17:29:30.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"DanBuchan","name":"Daniel","path":"/DanBuchan","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1756584?s=80&v=4"},"commit":{"message":"added a commandline option to auto switch on iterate option is sequences are long","shortMessageHtmlLink":"added a commandline option to auto switch on iterate option is sequen…"}},{"before":"b93d374cb8d29fa9ba659836364bc1d6ba302df7","after":"a84817884e6f1183ad8bab36199039e7c5f16eab","ref":"refs/heads/main","pushedAt":"2024-01-26T15:01:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Update README.md\n\nChanged --plddt_filter doc from [0-1] to [0-100]","shortMessageHtmlLink":"Update README.md"}},{"before":"dba34404dddd57cb81e9c65c64e4b8c7aedcac61","after":"b93d374cb8d29fa9ba659836364bc1d6ba302df7","ref":"refs/heads/main","pushedAt":"2023-12-07T00:27:11.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Merge pull request #4 from andymlau/main\n\nUpdated Merizo with return_indices flag for PSIPRED workbench","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2029624771\" data-permission-text=\"Title is private\" data-url=\"https://github.com/psipred/Merizo/issues/4\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/psipred/Merizo/pull/4/hovercard\" href=\"https://github.com/psipred/Merizo/pull/4\">#4</a> from andymlau/main"}},{"before":"ca33ecd39cbeb10d8779170b8b928ca3c118eb2e","after":"dba34404dddd57cb81e9c65c64e4b8c7aedcac61","ref":"refs/heads/main","pushedAt":"2023-10-13T22:02:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Create CITATION.cff","shortMessageHtmlLink":"Create CITATION.cff"}},{"before":"504c6b075d9fcd97a24fac1c8ae1f673c8acc561","after":"ca33ecd39cbeb10d8779170b8b928ca3c118eb2e","ref":"refs/heads/main","pushedAt":"2023-10-13T20:34:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Delete datasets/README","shortMessageHtmlLink":"Delete datasets/README"}},{"before":"20a9ccf530966a109a10d91fba1fcb8a09aef32f","after":"504c6b075d9fcd97a24fac1c8ae1f673c8acc561","ref":"refs/heads/main","pushedAt":"2023-10-13T20:33:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Delete datasets/CATH-663.csv","shortMessageHtmlLink":"Delete datasets/CATH-663.csv"}},{"before":"fe31f94b9dc24188d12d864e353c8e7429a6b9a4","after":"20a9ccf530966a109a10d91fba1fcb8a09aef32f","ref":"refs/heads/main","pushedAt":"2023-10-13T20:33:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Delete datasets/CATH-17287.csv","shortMessageHtmlLink":"Delete datasets/CATH-17287.csv"}},{"before":"3e90c1fe69742e5ea8f5d7f39ac2bd93276f12a7","after":"fe31f94b9dc24188d12d864e353c8e7429a6b9a4","ref":"refs/heads/main","pushedAt":"2023-10-13T20:33:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Delete datasets/AFDB-7502.csv","shortMessageHtmlLink":"Delete datasets/AFDB-7502.csv"}},{"before":"09c6a61eb6c181046339617c634c8fad19352f1f","after":"3e90c1fe69742e5ea8f5d7f39ac2bd93276f12a7","ref":"refs/heads/main","pushedAt":"2023-10-13T20:33:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Delete datasets/AFDB-1195.csv","shortMessageHtmlLink":"Delete datasets/AFDB-1195.csv"}},{"before":"f32f0602734d3ec97f8c09dabdd8cb489fff247d","after":"09c6a61eb6c181046339617c634c8fad19352f1f","ref":"refs/heads/main","pushedAt":"2023-10-13T20:32:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Added ECOD domain definitions for non-AFDB proteins","shortMessageHtmlLink":"Added ECOD domain definitions for non-AFDB proteins"}},{"before":"51c097e0ca23cb5e39b2eb9b8cb7a44809c5cc6b","after":"f32f0602734d3ec97f8c09dabdd8cb489fff247d","ref":"refs/heads/main","pushedAt":"2023-10-13T20:28:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Added AFDB-27 runtime benchmark set","shortMessageHtmlLink":"Added AFDB-27 runtime benchmark set"}},{"before":"24ad90e0a849cde5f16d9a9f7deeeaf790b72054","after":"51c097e0ca23cb5e39b2eb9b8cb7a44809c5cc6b","ref":"refs/heads/main","pushedAt":"2023-10-13T20:17:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Added datasets used from DPAM, ECOD, SCOPe and CATH","shortMessageHtmlLink":"Added datasets used from DPAM, ECOD, SCOPe and CATH"}},{"before":"e868e66843fdcf97de8cadb25b086b0a3928637f","after":"24ad90e0a849cde5f16d9a9f7deeeaf790b72054","ref":"refs/heads/main","pushedAt":"2023-08-28T23:37:21.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/psipred/Merizo","shortMessageHtmlLink":"Merge branch 'main' of <a href=\"https://github.com/psipred/Merizo\">https://github.com/psipred/Merizo</a>"}},{"before":"04930930e1cb26ac685a5e04cb1a5ae2ca3e0190","after":"e868e66843fdcf97de8cadb25b086b0a3928637f","ref":"refs/heads/main","pushedAt":"2023-08-23T14:24:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Update mask_decoder.py","shortMessageHtmlLink":"Update mask_decoder.py"}},{"before":"66a3bfaad9e72a3200663dca47d6281eaa61a70d","after":"04930930e1cb26ac685a5e04cb1a5ae2ca3e0190","ref":"refs/heads/main","pushedAt":"2023-08-23T14:23:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"andymlau","name":"Andy Lau","path":"/andymlau","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25254365?s=80&v=4"},"commit":{"message":"Update mask_decoder.py","shortMessageHtmlLink":"Update mask_decoder.py"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0yM1QxMzo1NToxMy4wMDAwMDBazwAAAASG69MV","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0yM1QxMzo1NToxMy4wMDAwMDBazwAAAASG69MV","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wOC0yM1QxNDoyMzo1MC4wMDAwMDBazwAAAANw3-T_"}},"title":"Activity · psipred/Merizo"}