setup.py

#!/usr/bin/env python

from setuptools import setup
import os

version_txt_path = os.path.join(os.path.dirname(__file__), "pyqms", "version.txt")
with open(version_txt_path, "r") as version_file:
    pyqms_version = version_file.readline().strip()

setup(
    name="pyqms",
    version=pyqms_version,
    packages=["pyqms"],
    package_dir={"pyqms": "pyqms"},
    description="pyQms - Python module for accurate quantification of mass spectrometry data",
    package_data={
        "pyqms": [
            "version.txt",
            "kb/ext/unimod.xml",
        ]
    },
    install_requires=["pymzml", "openpyxl", "chemical_composition"],
    long_description="pyQms enables universal and accurate quantification of mass spectrometry data",
    author="Johannes Leufken, Anna Niehues, L. Peter Sarin, Florian Wessels, Michael Hippler, Sebastian A. Leidel and Christian Fufezan",
    author_email="christian@fufezan.net",
    url="https://github.com/pyQms/pyqms",
    license="The MIT License (MIT)",
    platforms="any that supports python 3.4",
    classifiers=[
        "Development Status :: 4 - Beta",
        "Environment :: Console",
        "Intended Audience :: Education",
        "Intended Audience :: Science/Research",
        "Intended Audience :: Developers",
        "Operating System :: MacOS :: MacOS X",
        "Operating System :: Microsoft :: Windows",
        "Operating System :: POSIX",
        "Operating System :: POSIX :: SunOS/Solaris",
        "Operating System :: Unix",
        "Programming Language :: Python :: 3",
        "Programming Language :: Python :: 3.5",
        "Topic :: Scientific/Engineering :: Astronomy",
        "Topic :: Scientific/Engineering :: Atmospheric Science",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "Topic :: Scientific/Engineering :: Chemistry",
        "Topic :: Scientific/Engineering :: Information Analysis",
        "Topic :: Scientific/Engineering :: Medical Science Apps.",
        "Topic :: Scientific/Engineering :: Physics",
    ],
)