diff --git a/.Rbuildignore b/.Rbuildignore index 0c15d76..1d00090 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -3,3 +3,4 @@ ^\.travis\.yml$ ^netlify\.toml$ ^appveyor\.yml$ +^LICENSE\.md$ diff --git a/.gitignore b/.gitignore index 5b6a065..7b732e7 100644 --- a/.gitignore +++ b/.gitignore @@ -2,3 +2,4 @@ .Rhistory .RData .Ruserdata +.DS_Store diff --git a/02-sampling.Rmd b/02-sampling.Rmd index e1f9967..c46bfc7 100644 --- a/02-sampling.Rmd +++ b/02-sampling.Rmd @@ -114,7 +114,7 @@ aged 50 years or older” or “persons aged 55 years or older”. The age distribution of the population and the survey eligibility criteria will affect the sample design in terms of the number of communities that you will need to sample ($m$) and the number of older persons ($n$) that can be sampled from each community. -The overall sample size for a RAM-OP sample should be at least $n = 192$ usually collected as $n = 12$ eligible subjects sampled from $m = 16$ communities. If older people make up a very small proportion (i.e. much less than 5%) of the total population and / or the average population of communities is small then you will usually need to sample more than m = 16 communities in order to get about $n = 192$ older people in the overall sample. This is likely to occur when there are fewer than 20 to 25 older people in a community of average size. +The overall sample size for a RAM-OP sample should be at least $n = 192$ usually collected as $n = 12$ eligible subjects sampled from $m = 16$ communities. If older people make up a very small proportion (i.e. much less than 5%) of the total population and / or the average population of communities is small then you will usually need to sample more than $m = 16$ communities in order to get about $n = 192$ older people in the overall sample. This is likely to occur when there are fewer than 20 to 25 older people in a community of average size. You can calculate the number of older people that you would expect to be living in a community of average size using the following formula: @@ -164,7 +164,7 @@ RANDBETWEEN(1, 4)   -**Step 3:** Using the *random starting point* and the *sampling interval*, select the sampling villages from a list of all villages organised/sorted by a **non-overalapping** spatial factor such as district or sub-district. +**Step 3:** Using the *random starting point* and the *sampling interval*, select the sampling villages from a list of all villages organised/sorted by a **non-overlapping** spatial factor such as district or sub-district. \newpage diff --git a/03-indicators.Rmd b/03-indicators.Rmd index f0e69b7..7c38636 100644 --- a/03-indicators.Rmd +++ b/03-indicators.Rmd @@ -447,7 +447,7 @@ These are standard case definitions for acute malnutrition in adults and recomme \newpage -```{block2, type = "rmdbox"} +```{block2, type = "rmdnote"} An estimate of GAM prevalence can be made using a classic estimator: $$\text{prevalence} = \frac{\text{number of respondents with MUAC < 210 mm}}{\text{total number of respondents}}$$ diff --git a/06-practical.Rmd b/06-practical.Rmd index 60f81ba..187677d 100644 --- a/06-practical.Rmd +++ b/06-practical.Rmd @@ -276,7 +276,7 @@ Here is a typical timetable of survey activities: * Review logistics arrangements with the trainees -**At the end of the trainin** +**At the end of the training** * Provide each trainee with a certificate of attendance * Pay the training incentives diff --git a/07-ram_op_software.Rmd b/07-ram_op_software.Rmd index 78f27b6..43e001f 100644 --- a/07-ram_op_software.Rmd +++ b/07-ram_op_software.Rmd @@ -19,13 +19,13 @@ This manual covers analysing your data using the **RAnalyticFlow** workflow. An To use the **RAnalyticFlow** workflow you must install: * **The *R Language for Data-Analysis and Graphics* (R)** : This is the *“engine”* which does all the -work of analysing your data. You can get the R installation program from: [http://cran.r-project.org](http://cran.r-project.org). Following are links to download operating sofware-specific versions of R: +work of analysing your data. You can get the R installation program from: [http://cran.r-project.org](http://cran.r-project.org). Following are links to download operating software-specific versions of R: * [Download R for Linux](https://cran.r-project.org/bin/linux/) * [Download R for (Mac) OS X](https://cran.r-project.org/bin/macosx/) - * [Download R for Windowx](https://cran.r-project.org/bin/windows/) + * [Download R for Windows](https://cran.r-project.org/bin/windows/) * **R packages** (libraries of functions needed to work with the **RAnalyticFlow** workflow) : You can install these from within **R** using the Package Installer function within R. The libraries needed are: @@ -55,7 +55,7 @@ install.packages(c("rJava", "JavaGD", "codetools", repos = "https://cloud.r-project.org/") ``` -The `repos` argument in the R command above specifies the CRAN mirror from which you to download the package/s you want to install. Here we specify the cloud-based mirror for CRAN provided by RStudio. If unspecified, the installiation process will prompt you to select a mirror from which to download packages from. If you already know the URL of the CRAN mirror you want to use, specify this in the `repos` argument. +The `repos` argument in the R command above specifies the CRAN mirror from which you to download the package/s you want to install. Here we specify the cloud-based mirror for CRAN provided by RStudio. If unspecified, the installation process will prompt you to select a mirror from which to download packages from. If you already know the URL of the CRAN mirror you want to use, specify this in the `repos` argument. Note that **RAnalyticFlow** may require you to have **Java** installed. Check the instructions on the **RAnalyticFlow** [download page](http://r.analyticflow.com/en/download/) and on this [starter guide](http://download.ef-prime.com/ranalyticflow/3.1.5/readme.html). @@ -98,7 +98,7 @@ Before you start work you will need to create a project for your survey: 2. Give your project a useful (i.e. descriptive and memorable) name. This might be a name that describes the survey. For example, if the survey was done in the Kereinik locality of West Darfur in December 2015 you might use the name **WD.Kereinik.Dec2015.RAMOP** -3. Give the location of your project directory or project folder. This is the directory or folder which contains your survey data file, your PSU file, the RAM-OP language file, and a copy of **RAMOP.rflow** (see previous page). The location of the project directory or project folder (labeled “Path” by the software) that **RAnalyticFlow** selects automatically will almost always be wrong. You need to specify this manually. +3. Give the location of your project directory or project folder. This is the directory or folder which contains your survey data file, your PSU file, the RAM-OP language file, and a copy of **RAMOP.rflow** (see previous page). The location of the project directory or project folder (labelled “Path” by the software) that **RAnalyticFlow** selects automatically will almost always be wrong. You need to specify this manually. 4. Click the **OK** button @@ -120,7 +120,7 @@ knitr::include_graphics("figures/runWorkflowRAF.png") Once this is done, you should: -1. Retrieve your survey data. This can be in EpiDat (REC) format or CSV format. Select and run the +1. Retrieve your survey data. This can be in EpiData (REC) format or CSV format. Select and run the appropriate **Survey Data** node and select the survey data file. 2. Retrieve the PSU date data. Select and run the **PSU Data** node and select your PSU file. diff --git a/DESCRIPTION b/DESCRIPTION index 744763e..06ac294 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: ramOPmanual Title: Rapid Assessment Method for Older People (RAM-OP): The Manual -Version: 0.1.0 +Version: 0.1.1 Authors@R: c( person("Pascale", "Fritsch", role = "aut"), person("Ernest", "Guevarra", email = "ernest@guevarra.io", role = c("aut", "cre")), @@ -14,7 +14,8 @@ Description: HelpAge International = 3.0.1) Imports: bookdown -License: MIT + file LICENSE \ No newline at end of file + diff --git a/LICENSE.md b/LICENSE.md new file mode 100644 index 0000000..882ddf1 --- /dev/null +++ b/LICENSE.md @@ -0,0 +1,595 @@ +GNU General Public License +========================== + +_Version 3, 29 June 2007_ +_Copyright © 2007 Free Software Foundation, Inc. <>_ + +Everyone is permitted to copy and distribute verbatim copies of this license +document, but changing it is not allowed. + +## Preamble + +The GNU General Public License is a free, copyleft license for software and other +kinds of works. + +The licenses for most software and other practical works are designed to take away +your freedom to share and change the works. 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You may not convey a covered work if you are a party to an arrangement with +a third party that is in the business of distributing software, under which you make +payment to the third party based on the extent of your activity of conveying the +work, and under which the third party grants, to any of the parties who would receive +the covered work from you, a discriminatory patent license **(a)** in connection with +copies of the covered work conveyed by you (or copies made from those copies), or **(b)** +primarily for and in connection with specific products or compilations that contain +the covered work, unless you entered into that arrangement, or that patent license +was granted, prior to 28 March 2007. + +Nothing in this License shall be construed as excluding or limiting any implied +license or other defenses to infringement that may otherwise be available to you +under applicable patent law. + +### 12. No Surrender of Others' Freedom + +If conditions are imposed on you (whether by court order, agreement or otherwise) +that contradict the conditions of this License, they do not excuse you from the +conditions of this License. If you cannot convey a covered work so as to satisfy +simultaneously your obligations under this License and any other pertinent +obligations, then as a consequence you may not convey it at all. For example, if you +agree to terms that obligate you to collect a royalty for further conveying from +those to whom you convey the Program, the only way you could satisfy both those terms +and this License would be to refrain entirely from conveying the Program. + +### 13. Use with the GNU Affero General Public License + +Notwithstanding any other provision of this License, you have permission to link or +combine any covered work with a work licensed under version 3 of the GNU Affero +General Public License into a single combined work, and to convey the resulting work. +The terms of this License will continue to apply to the part which is the covered +work, but the special requirements of the GNU Affero General Public License, section +13, concerning interaction through a network will apply to the combination as such. + +### 14. Revised Versions of this License + +The Free Software Foundation may publish revised and/or new versions of the GNU +General Public License from time to time. Such new versions will be similar in spirit +to the present version, but may differ in detail to address new problems or concerns. + +Each version is given a distinguishing version number. If the Program specifies that +a certain numbered version of the GNU General Public License “or any later +version” applies to it, you have the option of following the terms and +conditions either of that numbered version or of any later version published by the +Free Software Foundation. If the Program does not specify a version number of the GNU +General Public License, you may choose any version ever published by the Free +Software Foundation. + +If the Program specifies that a proxy can decide which future versions of the GNU +General Public License can be used, that proxy's public statement of acceptance of a +version permanently authorizes you to choose that version for the Program. + +Later license versions may give you additional or different permissions. However, no +additional obligations are imposed on any author or copyright holder as a result of +your choosing to follow a later version. + +### 15. Disclaimer of Warranty + +THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. +EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES +PROVIDE THE PROGRAM “AS IS” WITHOUT WARRANTY OF ANY KIND, EITHER +EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF +MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE +QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE +DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION. + +### 16. Limitation of Liability + +IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY +COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS THE PROGRAM AS +PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY GENERAL, SPECIAL, +INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OR INABILITY TO USE THE +PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE +OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE +WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE +POSSIBILITY OF SUCH DAMAGES. + +### 17. Interpretation of Sections 15 and 16 + +If the disclaimer of warranty and limitation of liability provided above cannot be +given local legal effect according to their terms, reviewing courts shall apply local +law that most closely approximates an absolute waiver of all civil liability in +connection with the Program, unless a warranty or assumption of liability accompanies +a copy of the Program in return for a fee. + +_END OF TERMS AND CONDITIONS_ + +## How to Apply These Terms to Your New Programs + +If you develop a new program, and you want it to be of the greatest possible use to +the public, the best way to achieve this is to make it free software which everyone +can redistribute and change under these terms. + +To do so, attach the following notices to the program. It is safest to attach them +to the start of each source file to most effectively state the exclusion of warranty; +and each file should have at least the “copyright” line and a pointer to +where the full notice is found. + + + Copyright (C) 2019 HelpAge International,Valid International + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see . + +Also add information on how to contact you by electronic and paper mail. + +If the program does terminal interaction, make it output a short notice like this +when it starts in an interactive mode: + + ramOPmanual Copyright (C) 2019 HelpAge International,Valid International + This program comes with ABSOLUTELY NO WARRANTY; for details type 'show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type 'show c' for details. + +The hypothetical commands `show w` and `show c` should show the appropriate parts of +the General Public License. Of course, your program's commands might be different; +for a GUI interface, you would use an “about box”. + +You should also get your employer (if you work as a programmer) or school, if any, to +sign a “copyright disclaimer” for the program, if necessary. For more +information on this, and how to apply and follow the GNU GPL, see +<>. + +The GNU General Public License does not permit incorporating your program into +proprietary programs. If your program is a subroutine library, you may consider it +more useful to permit linking proprietary applications with the library. If this is +what you want to do, use the GNU Lesser General Public License instead of this +License. But first, please read +<>. diff --git a/README.md b/README.md index 016848c..bd00790 100644 --- a/README.md +++ b/README.md @@ -1,4 +1,4 @@ -# Rapid Assessment Method for Older People (RAM-OP): The Manual +# Rapid Assessment Method for Older People (RAM-OP): The Manual [![Travis-CI Build Status](https://travis-ci.org/rapidsurveys/ramOPmanual.svg?branch=master)](https://travis-ci.org/rapidsurveys/ramOPmanual) [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/rapidsurveys/ramOPmanual?branch=master&svg=true)](https://ci.appveyor.com/project/rapidsurveys/ramOPmanual) diff --git a/_bookdown.yml b/_bookdown.yml index 460a872..0fab082 100644 --- a/_bookdown.yml +++ b/_bookdown.yml @@ -1,6 +1,10 @@ book_filename: "ramOPmanual" +repo: https://github.com/rapidsurveys/ramOPmanual +output_dir: "docs" delete_merged_file: true language: + label: + fig: "Figure " + tab: "Table " ui: - chapter_name: "Chapter " -output_dir: "docs" + chapter_name: "" diff --git a/_output.yml b/_output.yml index 3e4ed13..92700d7 100644 --- a/_output.yml +++ b/_output.yml @@ -3,6 +3,8 @@ bookdown::gitbook: css: style.css fig_caption: yes split_by: chapter + #includes: + # in_header: google_analytics.html config: toc: collapse: section @@ -11,6 +13,10 @@ bookdown::gitbook: after: |
  • download: ["pdf", "epub"] + sharing: + github: yes + facebook: no + twitter: no bookdown::pdf_book: includes: in_header: preamble.tex @@ -18,4 +24,8 @@ bookdown::pdf_book: citation_package: natbib keep_tex: yes fig_caption: yes -bookdown::epub_book: default + toc_depth: 3 + toc_unnumbered: no + toc_appendix: yes +bookdown::epub_book: + stylesheet: style.css \ No newline at end of file diff --git a/before_body.tex b/before_body.tex new file mode 100644 index 0000000..dc41495 --- /dev/null +++ b/before_body.tex @@ -0,0 +1 @@ +\newpage \ No newline at end of file diff --git a/docs/conclusion.html b/docs/conclusion.html index d2c653f..d4defba 100644 --- a/docs/conclusion.html +++ b/docs/conclusion.html @@ -1,40 +1,40 @@ - - + - - - Rapid Assessment Method for Older People (RAM-OP): The Manual - - + + + 7 Conclusion | Rapid Assessment Method for Older People (RAM-OP): The Manual + + - + - - + + - + - + - + - + - - - + + + + @@ -49,20 +49,26 @@ @@ -208,7 +215,7 @@

    -

    Chapter 7 Conclusion

    +

    7 Conclusion

    We live in an ageing world, where people aged 60 or over will be 2 billion or about 22% of the world’s population by 2050.

    Currently, two in three people aged 60 years or older live in developing countries. By 2050, nearly four in five older people will be living in the developing world.

    The changing demographics of ageing combined with the increasing number of disasters will exert a disproportionate impact on the world’s oldest and poorest.

    @@ -237,13 +244,13 @@

    Chapter 7 Conclusion

    gitbook.require(["gitbook"], function(gitbook) { gitbook.start({ "sharing": { -"github": false, -"facebook": true, -"twitter": true, +"github": true, +"facebook": false, +"twitter": false, "google": false, "linkedin": false, "weibo": false, -"instapper": false, +"instapaper": false, "vk": false, "all": ["facebook", "google", "twitter", "linkedin", "weibo", "instapaper"] }, @@ -256,6 +263,10 @@

    Chapter 7 Conclusion

    "link": null, "text": null }, +"history": { +"link": null, +"text": null +}, "download": ["ramOPmanual.pdf", "ramOPmanual.epub"], "toc": { "collapse": "section" @@ -270,7 +281,7 @@

    Chapter 7 Conclusion

    var script = document.createElement("script"); script.type = "text/javascript"; var src = "true"; - if (src === "" || src === "true") src = "https://cdn.bootcss.com/mathjax/2.7.1/MathJax.js?config=TeX-MML-AM_CHTML"; + if (src === "" || src === "true") src = "https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-MML-AM_CHTML"; if (location.protocol !== "file:" && /^https?:/.test(src)) src = src.replace(/^https?:/, ''); script.src = src; diff --git a/docs/datasets.html b/docs/datasets.html index d886583..c013b97 100644 --- a/docs/datasets.html +++ b/docs/datasets.html @@ -1,40 +1,40 @@ - - + - - - Rapid Assessment Method for Older People (RAM-OP): The Manual - - + + + 4 Datasets | Rapid Assessment Method for Older People (RAM-OP): The Manual + + - + - - + + - + - + - + - + - - - + + + + @@ -49,20 +49,26 @@ @@ -208,7 +215,7 @@

    -

    Chapter 4 Datasets

    +

    4 Datasets

    This section details the RAM-OP datasets. The information presented here is of most use if you decide not to use the RAM-OP data entry and data checking software. You might, for example, decide to enter survey data using spreadsheet software such as Microsoft Excel. If you do this and want to use the RAM-OP data analysis software then you will need to export the data as a comma-separated-value (CSV) file with the same variable names, variable types and lengths, and using the same codes as shown in the tables in this section. For the main RAM-OP survey dataset these are the same variable names, variable types, variable lengths, codes, and in the same order as shown on the standard RAM-OP questionnaire.

    There are two RAM-OP datasets:

      @@ -340,13 +347,13 @@

      Chapter 4 Datasets

      gitbook.require(["gitbook"], function(gitbook) { gitbook.start({ "sharing": { -"github": false, -"facebook": true, -"twitter": true, +"github": true, +"facebook": false, +"twitter": false, "google": false, "linkedin": false, "weibo": false, -"instapper": false, +"instapaper": false, "vk": false, "all": ["facebook", "google", "twitter", "linkedin", "weibo", "instapaper"] }, @@ -359,6 +366,10 @@

      Chapter 4 Datasets

      "link": null, "text": null }, +"history": { +"link": null, +"text": null +}, "download": ["ramOPmanual.pdf", "ramOPmanual.epub"], "toc": { "collapse": "section" @@ -373,7 +384,7 @@

      Chapter 4 Datasets

      var script = document.createElement("script"); script.type = "text/javascript"; var src = "true"; - if (src === "" || src === "true") src = "https://cdn.bootcss.com/mathjax/2.7.1/MathJax.js?config=TeX-MML-AM_CHTML"; + if (src === "" || src === "true") src = "https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-MML-AM_CHTML"; if (location.protocol !== "file:" && /^https?:/.test(src)) src = src.replace(/^https?:/, ''); script.src = src; diff --git a/docs/index.html b/docs/index.html index d0f15e9..907bea0 100644 --- a/docs/index.html +++ b/docs/index.html @@ -1,40 +1,40 @@ - - + - - + + Rapid Assessment Method for Older People (RAM-OP): The Manual - - + + - - + + - + - + - + - - - + + + + @@ -49,20 +49,26 @@ @@ -209,8 +216,8 @@

      The RAM-OP Manual

      @@ -236,13 +243,13 @@

      The RAM-OP Manual

      gitbook.require(["gitbook"], function(gitbook) { gitbook.start({ "sharing": { -"github": false, -"facebook": true, -"twitter": true, +"github": true, +"facebook": false, +"twitter": false, "google": false, "linkedin": false, "weibo": false, -"instapper": false, +"instapaper": false, "vk": false, "all": ["facebook", "google", "twitter", "linkedin", "weibo", "instapaper"] }, @@ -255,6 +262,10 @@

      The RAM-OP Manual

      "link": null, "text": null }, +"history": { +"link": null, +"text": null +}, "download": ["ramOPmanual.pdf", "ramOPmanual.epub"], "toc": { "collapse": "section" @@ -269,7 +280,7 @@

      The RAM-OP Manual

      var script = document.createElement("script"); script.type = "text/javascript"; var src = "true"; - if (src === "" || src === "true") src = "https://cdn.bootcss.com/mathjax/2.7.1/MathJax.js?config=TeX-MML-AM_CHTML"; + if (src === "" || src === "true") src = "https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-MML-AM_CHTML"; if (location.protocol !== "file:" && /^https?:/.test(src)) src = src.replace(/^https?:/, ''); script.src = src; diff --git a/docs/indicators.html b/docs/indicators.html index 1c64f8b..59971fc 100644 --- a/docs/indicators.html +++ b/docs/indicators.html @@ -1,40 +1,40 @@ - - + - - - Rapid Assessment Method for Older People (RAM-OP): The Manual - - + + + 2 Indicators | Rapid Assessment Method for Older People (RAM-OP): The Manual + + - + - - + + - + - + - + - + - - - + + + + @@ -49,20 +49,26 @@ @@ -208,7 +215,7 @@

      -

      Chapter 2 Indicators

      +

      2 Indicators

      2.1 The RAM-OP indicator set

      RAM-OP surveys collect and report on data for a broad range of indicators relevant to older people.

      @@ -528,7 +535,7 @@

      2.1.14 Anthropometry and screenin

      Note : MUAC in adults should be measured on the non-dominant arm. This is usually the left arm. The importance of high levels of accuracy and precision at the individual level is of lesser importance in survey work compared to case-finding or diagnosis in clinical contexts, for example. This means that a simple rule such as “Always measure MUAC on the left arm” may be used.

      -
      +

      An estimate of GAM prevalence can be made using a classic estimator:

      \[\text{prevalence} = \frac{\text{number of respondents with MUAC < 210 mm}}{\text{total number of respondents}}\]

      The estimate of GAM prevalence made from the RAM-OP survey data is made using a PROBIT estimator. The PROBIT function is also known as the inverse cumulative distribution function. This function converts parameters of the distribution of an indicator (e.g. the mean and standard deviation of a normally distributed variable) into cumulative percentiles. This means that it is possible to use the normal PROBIT function with estimates of the mean and standard deviation of indicator values in a survey sample to predict (or estimate) the proportion of the population falling below a given threshold. For example, for data with a mean MUAC of 256 mm and a standard deviation of 28 mm the output of the normal PROBIT function for a threshold of 210 mm is 0.0502 meaning that 5.02% of the population are predicted (or estimated) to fall below the 210 mm threshold.

      @@ -681,13 +688,13 @@

      2.2 A note on data management and gitbook.require(["gitbook"], function(gitbook) { gitbook.start({ "sharing": { -"github": false, -"facebook": true, -"twitter": true, +"github": true, +"facebook": false, +"twitter": false, "google": false, "linkedin": false, "weibo": false, -"instapper": false, +"instapaper": false, "vk": false, "all": ["facebook", "google", "twitter", "linkedin", "weibo", "instapaper"] }, @@ -700,6 +707,10 @@

      2.2 A note on data management and "link": null, "text": null }, +"history": { +"link": null, +"text": null +}, "download": ["ramOPmanual.pdf", "ramOPmanual.epub"], "toc": { "collapse": "section" @@ -714,7 +725,7 @@

      2.2 A note on data management and var script = document.createElement("script"); script.type = "text/javascript"; var src = "true"; - if (src === "" || src === "true") src = "https://cdn.bootcss.com/mathjax/2.7.1/MathJax.js?config=TeX-MML-AM_CHTML"; + if (src === "" || src === "true") src = "https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-MML-AM_CHTML"; if (location.protocol !== "file:" && /^https?:/.test(src)) src = src.replace(/^https?:/, ''); script.src = src; diff --git a/docs/introduction.html b/docs/introduction.html index c0e2f64..302b5b7 100644 --- a/docs/introduction.html +++ b/docs/introduction.html @@ -1,40 +1,40 @@ - - + - - - Rapid Assessment Method for Older People (RAM-OP): The Manual - - + + + Introduction | Rapid Assessment Method for Older People (RAM-OP): The Manual + + - + - - + + - + - + - + - + - - - + + + + @@ -49,20 +49,26 @@ @@ -213,7 +220,7 @@

      Introduction

      Despite these potential vulnerabilities in humanitarian situations, older people are rarely identified as a group in need of specific nutritional or food assistance. Surveys and assessments almost always focus on children, and sometimes on pregnant and lactating women. Humanitarian workers argue that assessing the nutritional status and needs of older people is both costly and complicated. As a consequence, the nutritional status and needs of older people in crisis go unidentified and unaddressed.

      HelpAge International, VALID International, and Brixton Health, with financial assistance from the Humanitarian Innovation Fund (HIF), have developed a Rapid Assessment Method for Older People (RAM-OP) that provides accurate and reliable estimates of the needs of older people. The method uses simple procedures, in a short time frame (i.e. about two weeks including training, data collection, data entry, and data analysis), and at considerably lower cost than other methods. The RAM-OP method is based on the following principles:

        -
      • Use of a familiar “household survey” design employing a two-stage cluster sample design optimised to allow the use of a small primary sample ( m ≥ 16 clusters) and a small overall ( n ≥ 192) sample.

      • +
      • Use of a familiar “household survey” design employing a two-stage cluster sample design optimised to allow the use of a small primary sample (\(m ≥ 16\) clusters) and a small overall (\(n ≥ 192\)) sample.

      • Assessment of multiple dimensions of need in older people (including prevalence of global, moderate and severe acute malnutrition) using, whenever possible, standard and well-tested indicators and question sets.
      • Data analysis performed using modern computer-intensive methods to allow estimates of indicator levels to be made with useful precision using a small sample size.

      @@ -247,13 +254,13 @@

      Introduction

      gitbook.require(["gitbook"], function(gitbook) { gitbook.start({ "sharing": { -"github": false, -"facebook": true, -"twitter": true, +"github": true, +"facebook": false, +"twitter": false, "google": false, "linkedin": false, "weibo": false, -"instapper": false, +"instapaper": false, "vk": false, "all": ["facebook", "google", "twitter", "linkedin", "weibo", "instapaper"] }, @@ -266,6 +273,10 @@

      Introduction

      "link": null, "text": null }, +"history": { +"link": null, +"text": null +}, "download": ["ramOPmanual.pdf", "ramOPmanual.epub"], "toc": { "collapse": "section" @@ -280,7 +291,7 @@

      Introduction

      var script = document.createElement("script"); script.type = "text/javascript"; var src = "true"; - if (src === "" || src === "true") src = "https://cdn.bootcss.com/mathjax/2.7.1/MathJax.js?config=TeX-MML-AM_CHTML"; + if (src === "" || src === "true") src = "https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-MML-AM_CHTML"; if (location.protocol !== "file:" && /^https?:/.test(src)) src = src.replace(/^https?:/, ''); script.src = src; diff --git a/docs/libs/gitbook-2.6.7/css/plugin-bookdown.css b/docs/libs/gitbook-2.6.7/css/plugin-bookdown.css index a56b9e9..8e5bb8a 100644 --- a/docs/libs/gitbook-2.6.7/css/plugin-bookdown.css +++ b/docs/libs/gitbook-2.6.7/css/plugin-bookdown.css @@ -84,10 +84,10 @@ span.search-highlight { border-bottom: none; } -div.theorem, div.lemma, div.corollary, div.proposition { +div.theorem, div.lemma, div.corollary, div.proposition, div.conjecture { font-style: italic; } -span.theorem, span.lemma, span.corollary, span.proposition { +span.theorem, 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isObj=isObject(source),props=isObj?keys(source):undefined,methodNames=props&&props.length?baseFunctions(source,props):undefined;if(!(methodNames?methodNames.length:isObj)){methodNames=false;options=source;source=object;object=this}}if(!methodNames){methodNames=baseFunctions(source,keys(source))}var chain=true,index=-1,isFunc=isFunction(object),length=methodNames.length;if(options===false){chain=false}else if(isObject(options)&&"chain"in options){chain=options.chain}while(++index0||end<0)){return new LazyWrapper(result)}if(start<0){result=result.takeRight(-start)}else if(start){result=result.drop(start)}if(end!==undefined){end=+end||0;result=end<0?result.dropRight(-end):result.take(end-start)}return result};LazyWrapper.prototype.takeRightWhile=function(predicate,thisArg){return this.reverse().takeWhile(predicate,thisArg).reverse()};LazyWrapper.prototype.toArray=function(){return this.take(POSITIVE_INFINITY)};baseForOwn(LazyWrapper.prototype,function(func,methodName){var 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if(freeExports&&freeModule){if(moduleExports){(freeModule.exports=_)._=_}else{freeExports._=_}}else{root._=_}}).call(this)}).call(this,typeof global!=="undefined"?global:typeof self!=="undefined"?self:typeof window!=="undefined"?window:{})},{}],3:[function(require,module,exports){(function(window,document,undefined){var _MAP={8:"backspace",9:"tab",13:"enter",16:"shift",17:"ctrl",18:"alt",20:"capslock",27:"esc",32:"space",33:"pageup",34:"pagedown",35:"end",36:"home",37:"left",38:"up",39:"right",40:"down",45:"ins",46:"del",91:"meta",93:"meta",224:"meta"};var _KEYCODE_MAP={106:"*",107:"+",109:"-",110:".",111:"/",186:";",187:"=",188:",",189:"-",190:".",191:"/",192:"`",219:"[",220:"\\",221:"]",222:"'"};var _SHIFT_MAP={"~":"`","!":"1","@":"2","#":"3",$:"4","%":"5","^":"6","&":"7","*":"8","(":"9",")":"0",_:"-","+":"=",":":";",'"':"'","<":",",">":".","?":"/","|":"\\"};var _SPECIAL_ALIASES={option:"alt",command:"meta","return":"enter",escape:"esc",plus:"+",mod:/Mac|iPod|iPhone|iPad/.test(navigator.platform)?"meta":"ctrl"};var _REVERSE_MAP;for(var i=1;i<20;++i){_MAP[111+i]="f"+i}for(i=0;i<=9;++i){_MAP[i+96]=i}function _addEvent(object,type,callback){if(object.addEventListener){object.addEventListener(type,callback,false);return}object.attachEvent("on"+type,callback)}function _characterFromEvent(e){if(e.type=="keypress"){var character=String.fromCharCode(e.which);if(!e.shiftKey){character=character.toLowerCase()}return character}if(_MAP[e.which]){return _MAP[e.which]}if(_KEYCODE_MAP[e.which]){return _KEYCODE_MAP[e.which]}return String.fromCharCode(e.which).toLowerCase()}function _modifiersMatch(modifiers1,modifiers2){return modifiers1.sort().join(",")===modifiers2.sort().join(",")}function _eventModifiers(e){var modifiers=[];if(e.shiftKey){modifiers.push("shift")}if(e.altKey){modifiers.push("alt")}if(e.ctrlKey){modifiers.push("ctrl")}if(e.metaKey){modifiers.push("meta")}return modifiers}function _preventDefault(e){if(e.preventDefault){e.preventDefault();return}e.returnValue=false}function _stopPropagation(e){if(e.stopPropagation){e.stopPropagation();return}e.cancelBubble=true}function _isModifier(key){return key=="shift"||key=="ctrl"||key=="alt"||key=="meta"}function _getReverseMap(){if(!_REVERSE_MAP){_REVERSE_MAP={};for(var key in _MAP){if(key>95&&key<112){continue}if(_MAP.hasOwnProperty(key)){_REVERSE_MAP[_MAP[key]]=key}}}return _REVERSE_MAP}function _pickBestAction(key,modifiers,action){if(!action){action=_getReverseMap()[key]?"keydown":"keypress"}if(action=="keypress"&&modifiers.length){action="keydown"}return action}function _keysFromString(combination){if(combination==="+"){return["+"]}combination=combination.replace(/\+{2}/g,"+plus");return combination.split("+")}function _getKeyInfo(combination,action){var keys;var key;var i;var modifiers=[];keys=_keysFromString(combination);for(i=0;i1){_bindSequence(combination,sequence,callback,action);return}info=_getKeyInfo(combination,action);self._callbacks[info.key]=self._callbacks[info.key]||[];_getMatches(info.key,info.modifiers,{type:info.action},sequenceName,combination,level);self._callbacks[info.key][sequenceName?"unshift":"push"]({callback:callback,modifiers:info.modifiers,action:info.action,seq:sequenceName,level:level,combo:combination})}self._bindMultiple=function(combinations,callback,action){for(var i=0;i-1){return false}if(_belongsTo(element,self.target)){return false}return element.tagName=="INPUT"||element.tagName=="SELECT"||element.tagName=="TEXTAREA"||element.isContentEditable};Mousetrap.prototype.handleKey=function(){var self=this;return self._handleKey.apply(self,arguments)};Mousetrap.init=function(){var documentMousetrap=Mousetrap(document);for(var method in documentMousetrap){if(method.charAt(0)!=="_"){Mousetrap[method]=function(method){return function(){return documentMousetrap[method].apply(documentMousetrap,arguments)}}(method)}}};Mousetrap.init();window.Mousetrap=Mousetrap;if(typeof module!=="undefined"&&module.exports){module.exports=Mousetrap}if(typeof define==="function"&&define.amd){define(function(){return Mousetrap})}})(window,document)},{}],4:[function(require,module,exports){(function(process){function normalizeArray(parts,allowAboveRoot){var up=0;for(var i=parts.length-1;i>=0;i--){var last=parts[i];if(last==="."){parts.splice(i,1)}else if(last===".."){parts.splice(i,1);up++}else if(up){parts.splice(i,1);up--}}if(allowAboveRoot){for(;up--;up){parts.unshift("..")}}return parts}var splitPathRe=/^(\/?|)([\s\S]*?)((?:\.{1,2}|[^\/]+?|)(\.[^.\/]*|))(?:[\/]*)$/;var splitPath=function(filename){return splitPathRe.exec(filename).slice(1)};exports.resolve=function(){var resolvedPath="",resolvedAbsolute=false;for(var i=arguments.length-1;i>=-1&&!resolvedAbsolute;i--){var path=i>=0?arguments[i]:process.cwd();if(typeof path!=="string"){throw new TypeError("Arguments to path.resolve must be strings")}else if(!path){continue}resolvedPath=path+"/"+resolvedPath;resolvedAbsolute=path.charAt(0)==="/"}resolvedPath=normalizeArray(filter(resolvedPath.split("/"),function(p){return!!p}),!resolvedAbsolute).join("/");return(resolvedAbsolute?"/":"")+resolvedPath||"."};exports.normalize=function(path){var isAbsolute=exports.isAbsolute(path),trailingSlash=substr(path,-1)==="/";path=normalizeArray(filter(path.split("/"),function(p){return!!p}),!isAbsolute).join("/");if(!path&&!isAbsolute){path="."}if(path&&trailingSlash){path+="/"}return(isAbsolute?"/":"")+path};exports.isAbsolute=function(path){return path.charAt(0)==="/"};exports.join=function(){var paths=Array.prototype.slice.call(arguments,0);return exports.normalize(filter(paths,function(p,index){if(typeof p!=="string"){throw new TypeError("Arguments to path.join must be strings")}return p}).join("/"))};exports.relative=function(from,to){from=exports.resolve(from).substr(1);to=exports.resolve(to).substr(1);function trim(arr){var start=0;for(;start=0;end--){if(arr[end]!=="")break}if(start>end)return[];return arr.slice(start,end-start+1)}var fromParts=trim(from.split("/"));var toParts=trim(to.split("/"));var length=Math.min(fromParts.length,toParts.length);var samePartsLength=length;for(var i=0;i1){for(var i=1;i= 0x80 (not a basic code point)","invalid-input":"Invalid input"},baseMinusTMin=base-tMin,floor=Math.floor,stringFromCharCode=String.fromCharCode,key;function error(type){throw RangeError(errors[type])}function map(array,fn){var length=array.length;var result=[];while(length--){result[length]=fn(array[length])}return result}function mapDomain(string,fn){var parts=string.split("@");var result="";if(parts.length>1){result=parts[0]+"@";string=parts[1]}string=string.replace(regexSeparators,".");var labels=string.split(".");var encoded=map(labels,fn).join(".");return result+encoded}function ucs2decode(string){var output=[],counter=0,length=string.length,value,extra;while(counter=55296&&value<=56319&&counter65535){value-=65536;output+=stringFromCharCode(value>>>10&1023|55296);value=56320|value&1023}output+=stringFromCharCode(value);return output}).join("")}function basicToDigit(codePoint){if(codePoint-48<10){return codePoint-22}if(codePoint-65<26){return codePoint-65}if(codePoint-97<26){return codePoint-97}return base}function digitToBasic(digit,flag){return digit+22+75*(digit<26)-((flag!=0)<<5)}function adapt(delta,numPoints,firstTime){var k=0;delta=firstTime?floor(delta/damp):delta>>1;delta+=floor(delta/numPoints);for(;delta>baseMinusTMin*tMax>>1;k+=base){delta=floor(delta/baseMinusTMin)}return floor(k+(baseMinusTMin+1)*delta/(delta+skew))}function decode(input){var output=[],inputLength=input.length,out,i=0,n=initialN,bias=initialBias,basic,j,index,oldi,w,k,digit,t,baseMinusT;basic=input.lastIndexOf(delimiter);if(basic<0){basic=0}for(j=0;j=128){error("not-basic")}output.push(input.charCodeAt(j))}for(index=basic>0?basic+1:0;index=inputLength){error("invalid-input")}digit=basicToDigit(input.charCodeAt(index++));if(digit>=base||digit>floor((maxInt-i)/w)){error("overflow")}i+=digit*w;t=k<=bias?tMin:k>=bias+tMax?tMax:k-bias;if(digitfloor(maxInt/baseMinusT)){error("overflow")}w*=baseMinusT}out=output.length+1;bias=adapt(i-oldi,out,oldi==0);if(floor(i/out)>maxInt-n){error("overflow")}n+=floor(i/out);i%=out;output.splice(i++,0,n)}return ucs2encode(output)}function encode(input){var n,delta,handledCPCount,basicLength,bias,j,m,q,k,t,currentValue,output=[],inputLength,handledCPCountPlusOne,baseMinusT,qMinusT;input=ucs2decode(input);inputLength=input.length;n=initialN;delta=0;bias=initialBias;for(j=0;j=n&¤tValuefloor((maxInt-delta)/handledCPCountPlusOne)){error("overflow")}delta+=(m-n)*handledCPCountPlusOne;n=m;for(j=0;jmaxInt){error("overflow")}if(currentValue==n){for(q=delta,k=base;;k+=base){t=k<=bias?tMin:k>=bias+tMax?tMax:k-bias;if(q0&&len>maxKeys){len=maxKeys}for(var i=0;i=0){kstr=x.substr(0,idx);vstr=x.substr(idx+1)}else{kstr=x;vstr=""}k=decodeURIComponent(kstr);v=decodeURIComponent(vstr);if(!hasOwnProperty(obj,k)){obj[k]=v}else if(isArray(obj[k])){obj[k].push(v)}else{obj[k]=[obj[k],v]}}return obj};var isArray=Array.isArray||function(xs){return Object.prototype.toString.call(xs)==="[object Array]"}},{}],8:[function(require,module,exports){"use strict";var stringifyPrimitive=function(v){switch(typeof v){case"string":return v;case"boolean":return v?"true":"false";case"number":return isFinite(v)?v:"";default:return""}};module.exports=function(obj,sep,eq,name){sep=sep||"&";eq=eq||"=";if(obj===null){obj=undefined}if(typeof obj==="object"){return map(objectKeys(obj),function(k){var ks=encodeURIComponent(stringifyPrimitive(k))+eq;if(isArray(obj[k])){return map(obj[k],function(v){return ks+encodeURIComponent(stringifyPrimitive(v))}).join(sep)}else{return ks+encodeURIComponent(stringifyPrimitive(obj[k]))}}).join(sep)}if(!name)return"";return encodeURIComponent(stringifyPrimitive(name))+eq+encodeURIComponent(stringifyPrimitive(obj))};var isArray=Array.isArray||function(xs){return Object.prototype.toString.call(xs)==="[object Array]"};function map(xs,f){if(xs.map)return xs.map(f);var res=[];for(var i=0;i",'"',"`"," ","\r","\n"," "],unwise=["{","}","|","\\","^","`"].concat(delims),autoEscape=["'"].concat(unwise),nonHostChars=["%","/","?",";","#"].concat(autoEscape),hostEndingChars=["/","?","#"],hostnameMaxLen=255,hostnamePartPattern=/^[a-z0-9A-Z_-]{0,63}$/,hostnamePartStart=/^([a-z0-9A-Z_-]{0,63})(.*)$/,unsafeProtocol={javascript:true,"javascript:":true},hostlessProtocol={javascript:true,"javascript:":true},slashedProtocol={http:true,https:true,ftp:true,gopher:true,file:true,"http:":true,"https:":true,"ftp:":true,"gopher:":true,"file:":true},querystring=require("querystring");function urlParse(url,parseQueryString,slashesDenoteHost){if(url&&isObject(url)&&url instanceof Url)return url;var u=new Url;u.parse(url,parseQueryString,slashesDenoteHost);return u}Url.prototype.parse=function(url,parseQueryString,slashesDenoteHost){if(!isString(url)){throw new TypeError("Parameter 'url' must be a string, not "+typeof url)}var rest=url;rest=rest.trim();var proto=protocolPattern.exec(rest);if(proto){proto=proto[0];var lowerProto=proto.toLowerCase();this.protocol=lowerProto;rest=rest.substr(proto.length)}if(slashesDenoteHost||proto||rest.match(/^\/\/[^@\/]+@[^@\/]+/)){var slashes=rest.substr(0,2)==="//";if(slashes&&!(proto&&hostlessProtocol[proto])){rest=rest.substr(2);this.slashes=true}}if(!hostlessProtocol[proto]&&(slashes||proto&&!slashedProtocol[proto])){var hostEnd=-1;for(var i=0;i127){newpart+="x"}else{newpart+=part[j]}}if(!newpart.match(hostnamePartPattern)){var validParts=hostparts.slice(0,i);var notHost=hostparts.slice(i+1);var bit=part.match(hostnamePartStart);if(bit){validParts.push(bit[1]);notHost.unshift(bit[2])}if(notHost.length){rest="/"+notHost.join(".")+rest}this.hostname=validParts.join(".");break}}}}if(this.hostname.length>hostnameMaxLen){this.hostname=""}else{this.hostname=this.hostname.toLowerCase()}if(!ipv6Hostname){var domainArray=this.hostname.split(".");var newOut=[];for(var i=0;i0?result.host.split("@"):false;if(authInHost){result.auth=authInHost.shift();result.host=result.hostname=authInHost.shift()}}result.search=relative.search;result.query=relative.query;if(!isNull(result.pathname)||!isNull(result.search)){result.path=(result.pathname?result.pathname:"")+(result.search?result.search:"")}result.href=result.format();return result}if(!srcPath.length){result.pathname=null;if(result.search){result.path="/"+result.search}else{result.path=null}result.href=result.format();return result}var last=srcPath.slice(-1)[0];var hasTrailingSlash=(result.host||relative.host)&&(last==="."||last==="..")||last==="";var up=0;for(var i=srcPath.length;i>=0;i--){last=srcPath[i];if(last=="."){srcPath.splice(i,1)}else if(last===".."){srcPath.splice(i,1);up++}else if(up){srcPath.splice(i,1);up--}}if(!mustEndAbs&&!removeAllDots){for(;up--;up){srcPath.unshift("..")}}if(mustEndAbs&&srcPath[0]!==""&&(!srcPath[0]||srcPath[0].charAt(0)!=="/")){srcPath.unshift("")}if(hasTrailingSlash&&srcPath.join("/").substr(-1)!=="/"){srcPath.push("")}var isAbsolute=srcPath[0]===""||srcPath[0]&&srcPath[0].charAt(0)==="/";if(psychotic){result.hostname=result.host=isAbsolute?"":srcPath.length?srcPath.shift():"";var authInHost=result.host&&result.host.indexOf("@")>0?result.host.split("@"):false;if(authInHost){result.auth=authInHost.shift();result.host=result.hostname=authInHost.shift()}}mustEndAbs=mustEndAbs||result.host&&srcPath.length;if(mustEndAbs&&!isAbsolute){srcPath.unshift("")}if(!srcPath.length){result.pathname=null;result.path=null}else{result.pathname=srcPath.join("/")}if(!isNull(result.pathname)||!isNull(result.search)){result.path=(result.pathname?result.pathname:"")+(result.search?result.search:"")}result.auth=relative.auth||result.auth;result.slashes=result.slashes||relative.slashes;result.href=result.format();return result};Url.prototype.parseHost=function(){var host=this.host;var port=portPattern.exec(host);if(port){port=port[0];if(port!==":"){this.port=port.substr(1)}host=host.substr(0,host.length-port.length)}if(host)this.hostname=host};function isString(arg){return typeof arg==="string"}function isObject(arg){return typeof arg==="object"&&arg!==null}function isNull(arg){return arg===null}function isNullOrUndefined(arg){return arg==null}},{punycode:6,querystring:9}],11:[function(require,module,exports){var $=require("jquery");function toggleDropdown(e){var $dropdown=$(e.currentTarget).parent().find(".dropdown-menu");$dropdown.toggleClass("open");e.stopPropagation();e.preventDefault()}function closeDropdown(e){$(".dropdown-menu").removeClass("open")}function init(){$(document).on("click",".toggle-dropdown",toggleDropdown);$(document).on("click",".dropdown-menu",function(e){e.stopPropagation()});$(document).on("click",closeDropdown)}module.exports={init:init}},{jquery:1}],12:[function(require,module,exports){var $=require("jquery");module.exports=$({})},{jquery:1}],13:[function(require,module,exports){var $=require("jquery");var _=require("lodash");var storage=require("./storage");var dropdown=require("./dropdown");var events=require("./events");var state=require("./state");var keyboard=require("./keyboard");var navigation=require("./navigation");var sidebar=require("./sidebar");var toolbar=require("./toolbar");function start(config){sidebar.init();keyboard.init();dropdown.init();navigation.init();toolbar.createButton({index:0,icon:"fa fa-align-justify",onClick:function(e){e.preventDefault();sidebar.toggle()}});events.trigger("start",config);navigation.notify()}var gitbook={start:start,events:events,state:state,toolbar:toolbar,sidebar:sidebar,storage:storage,keyboard:keyboard};var MODULES={gitbook:gitbook,jquery:$,lodash:_};window.gitbook=gitbook;window.$=$;window.jQuery=$;gitbook.require=function(mods,fn){mods=_.map(mods,function(mod){mod=mod.toLowerCase();if(!MODULES[mod]){throw new Error("GitBook module "+mod+" doesn't exist")}return MODULES[mod]});fn.apply(null,mods)};module.exports={}},{"./dropdown":11,"./events":12,"./keyboard":14,"./navigation":16,"./sidebar":18,"./state":19,"./storage":20,"./toolbar":21,jquery:1,lodash:2}],14:[function(require,module,exports){var Mousetrap=require("mousetrap");var navigation=require("./navigation");var sidebar=require("./sidebar");function bindShortcut(keys,fn){Mousetrap.bind(keys,function(e){fn();return false})}function init(){bindShortcut(["right"],function(e){navigation.goNext()});bindShortcut(["left"],function(e){navigation.goPrev()});bindShortcut(["s"],function(e){sidebar.toggle()})}module.exports={init:init,bind:bindShortcut}},{"./navigation":16,"./sidebar":18,mousetrap:3}],15:[function(require,module,exports){var state=require("./state");function showLoading(p){state.$book.addClass("is-loading");p.always(function(){state.$book.removeClass("is-loading")});return p}module.exports={show:showLoading}},{"./state":19}],16:[function(require,module,exports){var $=require("jquery");var url=require("url");var events=require("./events");var state=require("./state");var loading=require("./loading");var usePushState=typeof history.pushState!=="undefined";function handleNavigation(relativeUrl,push){var uri=url.resolve(window.location.pathname,relativeUrl);notifyPageChange();location.href=relativeUrl;return;return loading.show($.get(uri).done(function(html){if(push)history.pushState({path:uri},null,uri);html=html.replace(/<(\/?)(html|head|body)([^>]*)>/gi,function(a,b,c,d){return"<"+b+"div"+(b?"":' data-element="'+c+'"')+d+">"});var $page=$(html);var $pageHead=$page.find("[data-element=head]");var $pageBody=$page.find(".book");document.title=$pageHead.find("title").text();var $head=$("head");$head.find("link[rel=prev]").remove();$head.find("link[rel=next]").remove();$head.append($pageHead.find("link[rel=prev]"));$head.append($pageHead.find("link[rel=next]"));var bodyClass=$(".book").attr("class");var scrollPosition=$(".book-summary .summary").scrollTop();$pageBody.toggleClass("with-summary",$(".book").hasClass("with-summary"));$(".book").replaceWith($pageBody);$(".book").attr("class",bodyClass);$(".book-summary .summary").scrollTop(scrollPosition);state.update($("html"));preparePage()}).fail(function(e){location.href=relativeUrl}))}function updateNavigationPosition(){var bodyInnerWidth,pageWrapperWidth;bodyInnerWidth=parseInt($(".body-inner").css("width"),10);pageWrapperWidth=parseInt($(".page-wrapper").css("width"),10);$(".navigation-next").css("margin-right",bodyInnerWidth-pageWrapperWidth+"px")}function notifyPageChange(){events.trigger("page.change")}function preparePage(notify){var $bookBody=$(".book-body");var $bookInner=$bookBody.find(".body-inner");var $pageWrapper=$bookInner.find(".page-wrapper");updateNavigationPosition();$bookInner.scrollTop(0);$bookBody.scrollTop(0);if(notify!==false)notifyPageChange()}function isLeftClickEvent(e){return e.button===0}function isModifiedEvent(e){return!!(e.metaKey||e.altKey||e.ctrlKey||e.shiftKey)}function handlePagination(e){if(isModifiedEvent(e)||!isLeftClickEvent(e)){return}e.stopPropagation();e.preventDefault();var url=$(this).attr("href");if(url)handleNavigation(url,true)}function goNext(){var url=$(".navigation-next").attr("href");if(url)handleNavigation(url,true)}function goPrev(){var url=$(".navigation-prev").attr("href");if(url)handleNavigation(url,true)}function init(){$.ajaxSetup({});if(location.protocol!=="file:"){history.replaceState({path:window.location.href},"")}window.onpopstate=function(event){if(event.state===null){return}return handleNavigation(event.state.path,false)};$(document).on("click",".navigation-prev",handlePagination);$(document).on("click",".navigation-next",handlePagination);$(document).on("click",".summary [data-path] a",handlePagination);$(window).resize(updateNavigationPosition);preparePage(false)}module.exports={init:init,goNext:goNext,goPrev:goPrev,notify:notifyPageChange}},{"./events":12,"./loading":15,"./state":19,jquery:1,url:10}],17:[function(require,module,exports){module.exports={isMobile:function(){return document.body.clientWidth<=600}}},{}],18:[function(require,module,exports){var $=require("jquery");var _=require("lodash");var storage=require("./storage");var platform=require("./platform");var state=require("./state");function toggleSidebar(_state,animation){if(state!=null&&isOpen()==_state)return;if(animation==null)animation=true;state.$book.toggleClass("without-animation",!animation);state.$book.toggleClass("with-summary",_state);storage.set("sidebar",isOpen())}function isOpen(){return state.$book.hasClass("with-summary")}function init(){if(platform.isMobile()){toggleSidebar(false,false)}else{toggleSidebar(storage.get("sidebar",true),false)}$(document).on("click",".book-summary li.chapter a",function(e){if(platform.isMobile())toggleSidebar(false,false)})}function filterSummary(paths){var $summary=$(".book-summary");$summary.find("li").each(function(){var path=$(this).data("path");var st=paths==null||_.contains(paths,path);$(this).toggle(st);if(st)$(this).parents("li").show()})}module.exports={init:init,isOpen:isOpen,toggle:toggleSidebar,filter:filterSummary}},{"./platform":17,"./state":19,"./storage":20,jquery:1,lodash:2}],19:[function(require,module,exports){var $=require("jquery");var url=require("url");var path=require("path");var state={};state.update=function(dom){var $book=$(dom.find(".book"));state.$book=$book;state.level=$book.data("level");state.basePath=$book.data("basepath");state.innerLanguage=$book.data("innerlanguage");state.revision=$book.data("revision");state.filepath=$book.data("filepath");state.chapterTitle=$book.data("chapter-title");state.root=url.resolve(location.protocol+"//"+location.host,path.dirname(path.resolve(location.pathname.replace(/\/$/,"/index.html"),state.basePath))).replace(/\/?$/,"/");state.bookRoot=state.innerLanguage?url.resolve(state.root,".."):state.root};state.update($);module.exports=state},{jquery:1,path:4,url:10}],20:[function(require,module,exports){var baseKey="";module.exports={setBaseKey:function(key){baseKey=key},set:function(key,value){key=baseKey+":"+key;try{localStorage[key]=JSON.stringify(value)}catch(e){}},get:function(key,def){key=baseKey+":"+key;if(localStorage[key]===undefined)return def;try{var v=JSON.parse(localStorage[key]);return v==null?def:v}catch(err){return localStorage[key]||def}},remove:function(key){key=baseKey+":"+key;localStorage.removeItem(key)}}},{}],21:[function(require,module,exports){var $=require("jquery");var _=require("lodash");var events=require("./events");var buttons=[];function insertAt(parent,selector,index,element){var lastIndex=parent.children(selector).size();if(index<0){index=Math.max(0,lastIndex+1+index)}parent.append(element);if(index",{"class":"dropdown-menu",html:''});if(_.isString(dropdown)){$menu.append(dropdown)}else{var groups=_.map(dropdown,function(group){if(_.isArray(group))return group;else return[group]});_.each(groups,function(group){var $group=$("
      ",{"class":"buttons"});var sizeClass="size-"+group.length;_.each(group,function(btn){btn=_.defaults(btn||{},{text:"",className:"",onClick:defaultOnClick});var $btn=$("