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DESCRIPTION
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DESCRIPTION
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Package: MsBackendMassbank
Title: Mass Spectrometry Data Backend for MassBank record Files
Version: 1.13.1
Authors@R:
c(person(given = "RforMassSpectrometry Package Maintainer",
email = "maintainer@rformassspectrometry.org",
role = "cre"),
person(given = "Michael", family = "Witting",
role = c("aut"),
email = "michael.witting@helmholtz-muenchen.de",
comment = c(ORCID = "0000-0002-1462-4426")),
person(given = "Johannes", family = "Rainer",
email = "Johannes.Rainer@eurac.edu",
role = "aut",
comment = c(ORCID = "0000-0002-6977-7147")),
person(given = "Michael", family = "Stravs",
email = "stravs@imsb.biol.ethz.ch",
role = "ctb"))
Description: Mass spectrometry (MS) data backend supporting import and
export of MS/MS library spectra from MassBank record files.
Different backends are available that allow handling of data in
plain MassBank text file format or allow also to interact directly
with MassBank SQL databases. Objects from this package are supposed
to be used with the Spectra Bioconductor package. This package thus
adds MassBank support to the Spectra package.
Depends:
R (>= 4.0),
Spectra (>= 1.15.10)
Imports:
BiocParallel,
S4Vectors,
IRanges,
methods,
ProtGenerics (>= 1.35.3),
MsCoreUtils,
DBI,
utils
Suggests:
testthat,
knitr (>= 1.1.0),
roxygen2,
BiocStyle (>= 2.5.19),
RSQLite,
rmarkdown
License: Artistic-2.0
LazyData: yes
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/MsBackendMassbank/issues
URL: https://github.com/RforMassSpectrometry/MsBackendMassbank
biocViews: Infrastructure, MassSpectrometry, Metabolomics, DataImport
Roxygen: list(markdown=TRUE)
RoxygenNote: 7.3.2
Collate:
'hidden_aliases.R'
'MsBackendMassbank.R'
'MsBackendMassbankSql-functions.R'
'MsBackendMassbankSql.R'
'functions-massbank.R'