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Currently returning the posterior samples from Stan to R is very slow due to the CSV reading implemented in rstan, as is documented for example in here: stan-dev/rstan#1018. There is now faster CSV reading inbrms and also in cmdstanr. At least for cmdstanr backend we could use cmdstanr::read_cmdstan_csv (which also allows us to omit some variables from the output as in rstan), but as we work with the stanfit object in the post processing, we need some extra steps to convert the cmdstanr output to stanfit object.
The text was updated successfully, but these errors were encountered:
Currently returning the posterior samples from Stan to R is very slow due to the CSV reading implemented in
rstan
, as is documented for example in here: stan-dev/rstan#1018. There is now faster CSV reading inbrms
and also incmdstanr
. At least forcmdstanr
backend we could usecmdstanr::read_cmdstan_csv
(which also allows us to omit some variables from the output as inrstan
), but as we work with thestanfit
object in the post processing, we need some extra steps to convert the cmdstanr output tostanfit
object.The text was updated successfully, but these errors were encountered: