-
Notifications
You must be signed in to change notification settings - Fork 3
/
setup.py
121 lines (115 loc) · 2.85 KB
/
setup.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# This file is part of the `lipyd` python module
#
# Copyright (c) 2014-2018 - EMBL
#
# File author(s): Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://www.ebi.ac.uk/~denes
#
__revision__ = "$Id$"
import os
from setuptools import setup, find_packages
import imp
_version = imp.load_source(
'_version',
os.path.join('src', 'lipyd', '_version.py')
)
__version__ = _version.__version__
with open('README.rst') as f:
readme = f.read()
with open('HISTORY.rst') as f:
history = f.read()
setup(
name = 'lipyd',
version = __version__,
maintainer = 'Dénes Türei',
maintainer_email = 'turei.denes@gmail.com',
author = 'Dénes Türei',
author_email = 'turei.denes@gmail.com',
long_description = readme + '\n\n' + history,
keywords = [
'lipidomics',
'lipids',
'mass spectrometry',
'MS',
'MS2',
'LC MS/MS',
'lipid-protein interactions',
'lipid transfer proteins',
'glycerophospholipids',
'sphingolipids',
'metabolomics',
'metabolites',
'SwissLipids',
'LipidMaps',
'molecular weight',
'chemical formula',
'chemistry',
],
description = 'Analysis of lipidomics mass spectrometry data',
license = 'GPLv3',
platforms = [
'Linux',
'Unix',
'MacOSX',
'Windows',
],
url = ['https://saezlab.github.io/lipyd'],
download_url = ['https://github.com/saezlab/lipyd/archive/master.zip'],
classifiers = [
'Development Status :: 3 - Alpha',
'Intended Audience :: Developers',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: GNU General Public License v3 (GPLv3)',
'Operating System :: OS Independent',
'Programming Language :: Python',
'Natural Language :: English',
'Topic :: Scientific/Engineering :: Bio-Informatics',
'Topic :: Scientific/Engineering :: Chemistry'
],
package_dir = {'': 'src'},
packages = [
'lipyd',
'lipyd.reader',
'lipyd.data',
'lipyd.data.ms2_examples',
],
include_package_data = True,
install_requires = [
'numpy',
'scipy',
'matplotlib',
'fastcluster',
'pycurl',
'fabric3',
'lxml',
'xlrd',
'httplib2',
'seaborn',
'sklearn',
'xlrd',
'openpyxl',
'xlsxwriter',
'future',
'tqdm',
'xmltodict',
'bs4',
'regex',
'timeloop',
],
extras_require = {
'tests': [
'pytest',
],
'docs': [
'sphinx',
]
}
)