forked from pavithraes/dask-mini-tutorial
-
Notifications
You must be signed in to change notification settings - Fork 0
/
prep_data.py
107 lines (82 loc) · 2.95 KB
/
prep_data.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
#This script was modify from original https://github.com/coiled/pydata-global-dask/blob/master/prep.py
import time
import sys
import argparse
import os
from glob import glob
import tarfile
import urllib.request
import pandas as pd
DATASETS = ["flights", "all"]
here = os.path.dirname(__file__)
data_dir = os.path.abspath(os.path.join(here, "data"))
print(f"{data_dir=}")
def parse_args(args=None):
parser = argparse.ArgumentParser(
description="Downloads, generates and prepares data for the Dask tutorial."
)
parser.add_argument(
"--no-ssl-verify",
dest="no_ssl_verify",
action="store_true",
default=False,
help="Disables SSL verification.",
)
parser.add_argument(
"--small",
action="store_true",
default=None,
help="Whether to use smaller example datasets. Checks DASK_TUTORIAL_SMALL environment variable if not specified.",
)
parser.add_argument(
"-d", "--dataset", choices=DATASETS, help="Datasets to generate.", default="all"
)
return parser.parse_args(args)
if not os.path.exists(data_dir):
raise OSError(
"data/ directory not found, aborting data preparation. "
'Restore it with "git checkout data" from the base '
"directory."
)
def flights(small=None):
start = time.time()
flights_raw = os.path.join(data_dir, "nycflights.tar.gz")
flightdir = os.path.join(data_dir, "nycflights")
if small is None:
small = bool(os.environ.get("DASK_TUTORIAL_SMALL", False))
if small:
N = 500
else:
N = 10_000
if not os.path.exists(flights_raw):
print("- Downloading NYC Flights dataset... ", end="", flush=True)
url = "https://storage.googleapis.com/dask-tutorial-data/nycflights.tar.gz"
urllib.request.urlretrieve(url, flights_raw)
print("done", flush=True)
if not os.path.exists(flightdir):
print("- Extracting flight data... ", end="", flush=True)
tar_path = os.path.join(data_dir, "nycflights.tar.gz")
with tarfile.open(tar_path, mode="r:gz") as flights:
flights.extractall(data_dir)
if small:
for path in glob(os.path.join(data_dir, "nycflights", "*.csv")):
with open(path, "r") as f:
lines = f.readlines()[:1000]
with open(path, "w") as f:
f.writelines(lines)
print("done", flush=True)
else:
return
end = time.time()
print("** Created flights dataset! in {:0.2f}s**".format(end - start))
def main(args=None):
args = parse_args(args)
if args.no_ssl_verify:
print("- Disabling SSL Verification... ", end="", flush=True)
import ssl
ssl._create_default_https_context = ssl._create_unverified_context
print("done", flush=True)
if args.dataset == "flights" or args.dataset == "all":
flights(args.small)
if __name__ == "__main__":
sys.exit(main())