build.yml

name: build

on: [push]

jobs:
  build-linux:
    runs-on: ubuntu-latest
    strategy:
      max-parallel: 5

    steps:
    - uses: actions/checkout@v2
    - name: Set up Python 3.8
      uses: actions/setup-python@v2
      with:
        python-version: 3.8
    - name: Add conda to system path
      run: |
        # $CONDA is an environment variable pointing to the root of the miniconda directory
        echo $CONDA/bin >> $GITHUB_PATH
    - name: Install dependencies
      run: |
        conda env create -n micone -f env.yml
        source activate micone
        pip install .
        micone init --env micone-sparcc
    - name: Lint with flake8
      run: |
        source activate micone
        pip install flake8
        # stop the build if there are Python syntax errors or undefined names
        flake8 micone --count --select=E9,F63,F7,F82 --show-source --statistics
        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
        flake8 micone --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
    - name: Test with pytest
      run: |
        source activate micone
        pytest --cov=micone --cov-config=setup.cfg --cov-report=xml
    - name: "Upload coverage to Codecov"
      uses: codecov/codecov-action@v1
      with:
        fail_ci_if_error: true