From db45aa39e73bae6b6955c5fecbd8362bb9dc88f5 Mon Sep 17 00:00:00 2001 From: Ben Theunissen Date: Sat, 5 Aug 2023 21:47:10 -0400 Subject: [PATCH] Stringify dicts before insertion for object types (#22) * Stringify dicts before insertion * Update deps * Update deps * Allow altering column types * Revert, and push * Increase version --- poetry.lock | 2221 ++++++++++++++++++------------------ pyproject.toml | 6 +- target_clickhouse/sinks.py | 32 +- 3 files changed, 1170 insertions(+), 1089 deletions(-) diff --git a/poetry.lock b/poetry.lock index 57a87cf..3c4e928 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,75 +1,874 @@ -# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand. +[[package]] +name = "appdirs" +version = "1.4.4" +description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." +category = "main" +optional = false +python-versions = "*" + +[[package]] +name = "asynch" +version = "0.2.2" +description = "A asyncio driver for ClickHouse with native tcp protocol" +category = "main" +optional = false +python-versions = ">=3.7,<4.0" + +[package.dependencies] +ciso8601 = "*" +clickhouse-cityhash = "*" +leb128 = "*" +lz4 = "*" +pytz = "*" +tzlocal = "*" +zstd = "*" + +[[package]] +name = "attrs" +version = "23.1.0" +description = "Classes Without Boilerplate" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +importlib-metadata = {version = "*", markers = "python_version < \"3.8\""} + +[package.extras] +cov = ["attrs", "coverage[toml] (>=5.3)"] +dev = ["attrs", "pre-commit"] +docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"] +tests = ["attrs", "zope-interface"] +tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest-mypy-plugins", "pytest-xdist", "pytest (>=4.3.0)"] + +[[package]] +name = "backoff" +version = "2.2.1" +description = "Function decoration for backoff and retry" +category = "main" +optional = false +python-versions = ">=3.7,<4.0" + +[[package]] +name = "backports.zoneinfo" +version = "0.2.1" +description = "Backport of the standard library zoneinfo module" +category = "main" +optional = false +python-versions = ">=3.6" + +[package.extras] +tzdata = ["tzdata"] + +[[package]] +name = "boto3" +version = "1.28.20" +description = "The AWS SDK for Python" +category = "main" +optional = true +python-versions = ">= 3.7" + +[package.dependencies] +botocore = ">=1.31.20,<1.32.0" +jmespath = ">=0.7.1,<2.0.0" +s3transfer = ">=0.6.0,<0.7.0" + +[package.extras] +crt = ["botocore[crt] (>=1.21.0,<2.0a0)"] + +[[package]] +name = "botocore" +version = "1.31.20" +description = "Low-level, data-driven core of boto 3." +category = "main" +optional = true +python-versions = ">= 3.7" + +[package.dependencies] +jmespath = ">=0.7.1,<2.0.0" +python-dateutil = ">=2.1,<3.0.0" +urllib3 = ">=1.25.4,<1.27" + +[package.extras] +crt = ["awscrt (==0.16.26)"] + +[[package]] +name = "certifi" +version = "2023.7.22" +description = "Python package for providing Mozilla's CA Bundle." +category = "main" +optional = false +python-versions = ">=3.6" + +[[package]] +name = "cffi" +version = "1.15.1" +description = "Foreign Function Interface for Python calling C code." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +pycparser = "*" + +[[package]] +name = "charset-normalizer" +version = "3.2.0" +description = "The Real First Universal Charset Detector. 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Singer SDK." readme = "README.md" authors = ["Ben Theunissen"] @@ -15,7 +15,7 @@ packages = [ [tool.poetry.dependencies] python = "<3.12,>=3.7.1" -singer-sdk = { version="^0.28.0" } +singer-sdk = { version=">=0.28,<0.31" } fs-s3fs = { version = "^1.1.1", optional = true } clickhouse-sqlalchemy = "^0.2.4" @@ -23,7 +23,7 @@ clickhouse-sqlalchemy = "^0.2.4" pytest = "^7.2.1" tox = "^3.25.0" ruff = "^0.0.278" -singer-sdk = { version="^0.28.0", extras = ["testing"] } +singer-sdk = { version=">=0.28,<0.31", extras = ["testing"] } [tool.poetry.extras] s3 = ["fs-s3fs"] diff --git a/target_clickhouse/sinks.py b/target_clickhouse/sinks.py index 5bd358e..f0bbf60 100644 --- a/target_clickhouse/sinks.py +++ b/target_clickhouse/sinks.py @@ -2,8 +2,9 @@ from __future__ import annotations +import json import typing -from typing import TYPE_CHECKING +from typing import TYPE_CHECKING, Any, Iterable import sqlalchemy.types from clickhouse_sqlalchemy import ( @@ -154,3 +155,32 @@ def full_table_name(self) -> str: schema_name=self.schema_name, db_name=self.database_name, ) + + def bulk_insert_records( + self, + full_table_name: str, + schema: dict, + records: Iterable[dict[str, Any]], + ) -> int | None: + """Bulk insert records to an existing destination table. + + The default implementation uses a generic SQLAlchemy bulk insert operation. + This method may optionally be overridden by developers in order to provide + faster, native bulk uploads. + + Args: + full_table_name: the target table name. + schema: the JSON schema for the new table, to be used when inferring column + names. + records: the input records. + + Returns: + True if table exists, False if not, None if unsure or undetectable. + """ + # Need to convert any records with a dict type to a JSON string. + for record in records: + for key, value in record.items(): + if isinstance(value, dict): + record[key] = json.dumps(value) + + return super().bulk_insert_records(full_table_name, schema, records)