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setup.py
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setup.py
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import sys
from distutils.core import setup
from setuptools import find_packages
if sys.version_info < (3, 7, 0):
print('This package requires Python >= 3.7.0')
sys.exit(1)
setup(
name='spliceai-reforged',
version='0.1dev1',
description='',
author='Ilia Korvigo',
author_email='',
url='',
packages=find_packages(),
package_data={
'splicelib.builtin_annotations': [
'grch37.txt',
'grch38.txt'
],
'splicelib.trained_models': [
'spliceai1.h5',
'spliceai2.h5',
'spliceai3.h5',
'spliceai4.h5',
'spliceai5.h5'
]
},
install_requires=[
"importlib_resources ; python_version<'3.9'",
'click>=7.1.2',
'numpy>=1.18.1',
'pandas>=1.0.3',
'tensorflow>=2.0',
'pysam>=0.15.3',
'pyfaidx>=0.5.9',
'ncls>=0.0.53'
],
scripts=['spliceai.py']
)