Contact me at createdatasol at gmail.com if you would like to use the software on a trial server.
Requires R and Shiny. Download the .zip file, unzip and run the following code (example for file on desktop on Windows)
library(shiny)
shiny::runApp('~/../Desktop/MetaMapR-master/MetaMapR-master')NOTE: modify file paths for OSX and LINUX
Version: 1.4.0 (1/18/2015)
News: See the newest features.
License: GNU General Public License (v3), read more
You can read the a pre-print of the full manuscript. If you find this tool useful please cite the published manuscript in Oxford Bioinformatics.
- add partial correlations
- add cytoscape.js networks
- enable network mapping
- How are multiple edge types handled in the network output?
The default setting for returning all edge types or only unique edges can be found under the network tab using the unique edges checkbox. If the option is selected then edges are returned based on a hierarchy Biochemical > Structural > Mass Spectral > Correlation, otherwise all edges are returned.