DESCRIPTION

Package: nanotail
Title: Analysis and visualisation of Nanopolish-based polyA lengths estimations
Version: 0.1.0
Authors@R: 
    person(given = "Pawel",
           family = "Krawczyk",
           role = c("aut", "cre"),
           email = "p.krawczyk@ibb.waw.pl",
           comment = c(ORCID = "0000-0001-9531-1298"))
Maintainer: <p.krawczyk@ibb.waw.pl>
Description: Provides functions for visualization and exploratory analysis of Oxford Nanopore direct RNA seq and Nanopolish based polyA lengths predictions.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.1
biocViews:
Depends: 
    R (>= 3.5)
Suggests: 
    annotables (>= 0.1.91),
    ggbiplot (>= 0.55),
    biomaRt (>= 2.38.0)
Imports: 
    magrittr (>= 1.5),
    tidyr (>= 0.8.2),
    dplyr (>= 0.7.8),
    data.table (>= 1.11.8),
    shiny (>= 1.3.1),
    assertthat (>= 0.2.1),
    assertive (>= 0.3.5),
    purrr (>= 0.2.5),
    FSA (>= 0.8.21),
    tibble (>= 1.4.2),
    shinydashboard (>= 0.7.1),
    shinyWidgets (>= 0.4.8),
    RColorBrewer (>= 1.1.2),
    edgeR (>= 3.24.3),
    forcats (>= 0.4.0),
    multcomp (>= 1.4.10),
    ggplot2 (>= 3.1.1),
    plotly (>= 4.8.0),
    testthat (>= 2.0.1),
    shinycssloaders (>= 0.2.0),
    DT (>= 0.5),
    stringr (>= 1.4.0),
    rlang (>= 0.3.0.1),
    ggsci (>= 2.9),
    AnnotationDbi,
    ggforce,
    ggrepel,
    modeest (>= 2.3.3),
    effsize
Remotes: 
    stephenturner/annotables,
    vqv/ggbiplot