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pom.xml
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pom.xml
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>edu.scripps.yates</groupId>
<artifactId>4DNucleome</artifactId>
<version>0.0.1-SNAPSHOT</version>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
<dependencies>
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>utilities</artifactId>
<version>1.6-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>dtaselectparser</artifactId>
<version>1.1.2-SNAPSHOT</version>
<exclusions>
<exclusion>
<artifactId>logback-classic</artifactId>
<groupId>ch.qos.logback</groupId>
</exclusion>
<exclusion>
<artifactId>logback-core</artifactId>
<groupId>ch.qos.logback</groupId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>pint.model</artifactId>
<version>1.0.1-SNAPSHOT</version>
<exclusions>
<exclusion>
<artifactId>logback-classic</artifactId>
<groupId>ch.qos.logback</groupId>
</exclusion>
<exclusion>
<artifactId>logback-core</artifactId>
<groupId>ch.qos.logback</groupId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>pint.excel</artifactId>
<version>1.0.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>pint.annotations</artifactId>
<version>1.0.3-SNAPSHOT</version>
</dependency>
<!-- https://mvnrepository.com/artifact/xalan/xalan -->
<dependency>
<groupId>xalan</groupId>
<artifactId>xalan</artifactId>
<version>2.7.2</version>
</dependency>
<!-- To enable machine optimized matrix computation, the users should add the dependency of smile-netlib: -->
<dependency>
<groupId>com.github.haifengl</groupId>
<artifactId>smile-netlib</artifactId>
<version>1.5.2</version>
</dependency>
</dependencies>
<repositories>
<repository>
<releases>
<enabled>true</enabled>
</releases>
<snapshots>
<enabled>false</enabled>
</snapshots>
<id>ebi-repo</id>
<name>The EBI Maven 2 repository</name>
<url>http://www.ebi.ac.uk/~maven/m2repo</url>
</repository>
<repository>
<releases>
<enabled>false</enabled>
</releases>
<snapshots>
<enabled>true</enabled>
</snapshots>
<id>ebi-repo-snapshots</id>
<name>The EBI internal repository</name>
<url>http://www.ebi.ac.uk/~maven/m2repo_snapshots</url>
</repository>
<!-- <repository> -->
<!-- <id>genesis-maven2-repository</id> -->
<!-- <name>Genesis maven2 repository</name> -->
<!-- <url>http://genesis.UGent.be/maven2</url> -->
<!-- </repository> -->
<repository>
<id>JBoss</id>
<name>JBoss repository</name>
<url>https://repository.jboss.org/nexus/content/repositories/releases/</url>
</repository>
</repositories>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.5.1</version>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
</plugins>
</build>
</project>