From b728c516b3830eba31e555519f14427c4f707a8a Mon Sep 17 00:00:00 2001 From: Johannes Koester Date: Wed, 20 Dec 2023 20:38:47 +0100 Subject: [PATCH] fixes --- src/resources/report.html | 106502 +++++++++++++++++++++++++++++++++++ workflow/Snakefile | 12 +- 2 files changed, 106510 insertions(+), 4 deletions(-) create mode 100644 src/resources/report.html diff --git a/src/resources/report.html b/src/resources/report.html new file mode 100644 index 0000000..b5b6a4a --- /dev/null +++ b/src/resources/report.html @@ -0,0 +1,106502 @@ + + + + + + + + + + Snakemake Report + + + + + + + + + +
+

Loading Snakemake Report...

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+ + +
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+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/workflow/Snakefile b/workflow/Snakefile index c6b7674..f184446 100644 --- a/workflow/Snakefile +++ b/workflow/Snakefile @@ -2,6 +2,8 @@ rule all: input: "build/index.html", "build/style.css", + "build/resources/report.html", + rule build_css: input: @@ -20,16 +22,18 @@ rule build_html: input: config="config.yaml", output: - "build/index.html" + "build/index.html", conda: "envs/ytml.yaml" shell: "ytml src build {input.config} index.ytml.yaml" + rule copy_asset: input: - "src/{asset}" + "src/{asset}", output: - "build/{asset}" + "build/{asset}", shell: - "cp {input} {output}" \ No newline at end of file + "mkdir -p $(dirname {output}); " + "cp {input} {output}"