From 27f5379b82b8909f901febcbb7278778a5ffb0a7 Mon Sep 17 00:00:00 2001 From: Andy Boughton Date: Tue, 11 Feb 2020 18:19:31 -0500 Subject: [PATCH] Hotfix: do not hardcode build version --- util/ingest/processors.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/util/ingest/processors.py b/util/ingest/processors.py index cf929fb..6cf0923 100644 --- a/util/ingest/processors.py +++ b/util/ingest/processors.py @@ -62,7 +62,7 @@ def generate_manhattan(build: str, in_filename: str, out_filename: str) -> bool: manhattan_data = binner.get_result() - gl = get_genelocator('GRCh38', coding_only=False) + gl = get_genelocator(build, coding_only=False) for v_dict in manhattan_data['unbinned_variants']: # Annotate nearest gene(s) for all "top hits", and also clean up values so JS can handle them # It's possible to have more than one nearest gene for a given position (if variant is inside, not just near)