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DESCRIPTION
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Package: scMatchmaker
Title: Single Cell Matchmaker
Version: 0.99.0
Authors@R:
person(given = "X. Steve",
family = "Niu",
role = c("aut", "cre"),
email = "xin2001@med.cornell.edu",
comment = c(ORCID = "0000-0001-7689-0941"))
Description: Identify cell-cell ligand-receptor interactions in single cell data.
Maintainer: X. Steve Niu <xin2001@med.cornell.edu>
BugReports: https://github.com/stevexniu/scMatchmaker/issues
Depends: R (>= 3.5.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Collate:
'RcppExports.R'
'data.R'
'utils.R'
'processing.R'
'models.R'
'matchmake.R'
'matchmaker-class.R'
'plot.R'
'zzz.R'
LinkingTo:
Rcpp,
RcppEigen,
RcppProgress
Imports:
cowplot,
doParallel,
emdist,
foreach,
ggplot2 (>= 3.3.0),
gplots,
igraph,
irlba,
magrittr,
Matrix,
matrixStats,
methods,
parallel,
qgraph,
RColorBrewer,
Rcpp (>= 0.11.0),
reshape2,
reticulate,
seriation
Suggests:
knitr,
rmarkdown,
testthat,
vdiffr,
covr