diff --git a/tSNEplots_global_scaling.R b/tSNEplots_global_scaling.R index 2a8e222..5a5952f 100644 --- a/tSNEplots_global_scaling.R +++ b/tSNEplots_global_scaling.R @@ -63,7 +63,7 @@ names(read.csv("Sample1.csv")) ## IMPORTANT - ## The last user input required is on lines 103 and 104 --after "CurrentSampleCSV$" type in the name of your 'tSNE parameter, from above + ## The last user input required is on lines 106 and 107 --after "CurrentSampleCSV$" type in the name of your 'tSNE parameter, from above ##### STEP 2b: ESTABLISH GLOBAL SCALE LIMITS ##### @@ -82,7 +82,7 @@ ##### STEP 3: Loop with samples in separate folders ##### - ## First, change the tSNE parameters (on lines 103 and 104) + ## First, change the tSNE parameters (on lines 106 and 107) ## Then run all of the script below ## Set wd