dag.svg

<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
 "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
<!-- Generated by graphviz version 2.38.0 (20140413.2041)
 -->
<!-- Title: snakemake_dag Pages: 1 -->
<svg width="1249pt" height="548pt"
 viewBox="0.00 0.00 1249.33 548.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 544)">
<title>snakemake_dag</title>
<polygon fill="white" stroke="none" points="-4,4 -4,-544 1245.33,-544 1245.33,4 -4,4"/>
<!-- 0 -->
<g id="node1" class="node"><title>0</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M996.007,-180C996.007,-180 956.599,-180 956.599,-180 950.599,-180 944.599,-174 944.599,-168 944.599,-168 944.599,-156 944.599,-156 944.599,-150 950.599,-144 956.599,-144 956.599,-144 996.007,-144 996.007,-144 1002.01,-144 1008.01,-150 1008.01,-156 1008.01,-156 1008.01,-168 1008.01,-168 1008.01,-174 1002.01,-180 996.007,-180"/>
<text text-anchor="middle" x="976.303" y="-159" font-family="sans" font-size="10.00">anvi_merge</text>
</g>
<!-- 20 -->
<g id="node21" class="node"><title>20</title>
<path fill="none" stroke="#56d8a9" stroke-width="2" d="M810.393,-108C810.393,-108 752.213,-108 752.213,-108 746.213,-108 740.213,-102 740.213,-96 740.213,-96 740.213,-84 740.213,-84 740.213,-78 746.213,-72 752.213,-72 752.213,-72 810.393,-72 810.393,-72 816.393,-72 822.393,-78 822.393,-84 822.393,-84 822.393,-96 822.393,-96 822.393,-102 816.393,-108 810.393,-108"/>
<text text-anchor="middle" x="781.303" y="-87" font-family="sans" font-size="10.00">anvi_summarize</text>
</g>
<!-- 0&#45;&gt;20 -->
<g id="edge31" class="edge"><title>0&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M944.539,-149.597C914.156,-138.691 867.831,-122.061 832.283,-109.3"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="833.159,-105.896 822.564,-105.812 830.794,-112.485 833.159,-105.896"/>
</g>
<!-- 1 -->
<g id="node2" class="node"><title>1</title>
<path fill="none" stroke="#afd856" stroke-width="2" d="M418.27,-396C418.27,-396 316.336,-396 316.336,-396 310.336,-396 304.336,-390 304.336,-384 304.336,-384 304.336,-372 304.336,-372 304.336,-366 310.336,-360 316.336,-360 316.336,-360 418.27,-360 418.27,-360 424.27,-360 430.27,-366 430.27,-372 430.27,-372 430.27,-384 430.27,-384 430.27,-390 424.27,-396 418.27,-396"/>
<text text-anchor="middle" x="367.303" y="-381" font-family="sans" font-size="10.00">anvi_gen_contigs_database</text>
<text text-anchor="middle" x="367.303" y="-369" font-family="sans" font-size="10.00">assembly: X</text>
</g>
<!-- 4 -->
<g id="node5" class="node"><title>4</title>
<path fill="none" stroke="#56d8a9" stroke-width="2" d="M600.393,-108C600.393,-108 542.213,-108 542.213,-108 536.213,-108 530.213,-102 530.213,-96 530.213,-96 530.213,-84 530.213,-84 530.213,-78 536.213,-72 542.213,-72 542.213,-72 600.393,-72 600.393,-72 606.393,-72 612.393,-78 612.393,-84 612.393,-84 612.393,-96 612.393,-96 612.393,-102 606.393,-108 600.393,-108"/>
<text text-anchor="middle" x="571.303" y="-87" font-family="sans" font-size="10.00">anvi_summarize</text>
</g>
<!-- 1&#45;&gt;4 -->
<g id="edge9" class="edge"><title>1&#45;&gt;4</title>
<path fill="none" stroke="grey" stroke-width="2" d="M430.412,-366.779C477.648,-357.748 536.684,-343.057 552.303,-324 601.096,-264.467 588.021,-165.261 577.967,-117.84"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="581.366,-117.002 575.766,-108.009 574.536,-118.532 581.366,-117.002"/>
</g>
<!-- 7 -->
<g id="node8" class="node"><title>7</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M531.771,-324C531.771,-324 444.835,-324 444.835,-324 438.835,-324 432.835,-318 432.835,-312 432.835,-312 432.835,-300 432.835,-300 432.835,-294 438.835,-288 444.835,-288 444.835,-288 531.771,-288 531.771,-288 537.771,-288 543.771,-294 543.771,-300 543.771,-300 543.771,-312 543.771,-312 543.771,-318 537.771,-324 531.771,-324"/>
<text text-anchor="middle" x="488.303" y="-303" font-family="sans" font-size="10.00">anvi_export_gene_calls</text>
</g>
<!-- 1&#45;&gt;7 -->
<g id="edge14" class="edge"><title>1&#45;&gt;7</title>
<path fill="none" stroke="grey" stroke-width="2" d="M396.903,-359.876C412.87,-350.639 432.763,-339.131 449.909,-329.212"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="451.686,-332.227 458.589,-324.19 448.181,-326.168 451.686,-332.227"/>
</g>
<!-- 11 -->
<g id="node12" class="node"><title>11</title>
<path fill="none" stroke="#80d856" stroke-width="2" d="M217.676,-252C217.676,-252 176.93,-252 176.93,-252 170.93,-252 164.93,-246 164.93,-240 164.93,-240 164.93,-228 164.93,-228 164.93,-222 170.93,-216 176.93,-216 176.93,-216 217.676,-216 217.676,-216 223.676,-216 229.676,-222 229.676,-228 229.676,-228 229.676,-240 229.676,-240 229.676,-246 223.676,-252 217.676,-252"/>
<text text-anchor="middle" x="197.303" y="-231" font-family="sans" font-size="10.00">anvi_profile</text>
</g>
<!-- 1&#45;&gt;11 -->
<g id="edge19" class="edge"><title>1&#45;&gt;11</title>
<path fill="none" stroke="grey" stroke-width="2" d="M348.89,-359.817C329.113,-341.552 296.577,-312.046 267.303,-288 255.053,-277.938 241.203,-267.304 229.075,-258.224"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="231.107,-255.373 220.995,-252.212 226.929,-260.989 231.107,-255.373"/>
</g>
<!-- 23 -->
<g id="node24" class="node"><title>23</title>
<path fill="none" stroke="#80d856" stroke-width="2" d="M98.6761,-252C98.6761,-252 57.9299,-252 57.9299,-252 51.9299,-252 45.9299,-246 45.9299,-240 45.9299,-240 45.9299,-228 45.9299,-228 45.9299,-222 51.9299,-216 57.9299,-216 57.9299,-216 98.6761,-216 98.6761,-216 104.676,-216 110.676,-222 110.676,-228 110.676,-228 110.676,-240 110.676,-240 110.676,-246 104.676,-252 98.6761,-252"/>
<text text-anchor="middle" x="78.303" y="-231" font-family="sans" font-size="10.00">anvi_profile</text>
</g>
<!-- 1&#45;&gt;23 -->
<g id="edge35" class="edge"><title>1&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M327.932,-359.997C308.71,-350.759 285.802,-338.301 267.303,-324 250.131,-310.725 252.48,-299.862 234.303,-288 199.352,-265.192 153.567,-251.166 120.65,-243.321"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="121.403,-239.903 110.874,-241.082 119.84,-246.726 121.403,-239.903"/>
</g>
<!-- 26 -->
<g id="node27" class="node"><title>26</title>
<path fill="none" stroke="#56d8d8" stroke-width="2" d="M480.883,-252C480.883,-252 407.723,-252 407.723,-252 401.723,-252 395.723,-246 395.723,-240 395.723,-240 395.723,-228 395.723,-228 395.723,-222 401.723,-216 407.723,-216 407.723,-216 480.883,-216 480.883,-216 486.883,-216 492.883,-222 492.883,-228 492.883,-228 492.883,-240 492.883,-240 492.883,-246 486.883,-252 480.883,-252"/>
<text text-anchor="middle" x="444.303" y="-231" font-family="sans" font-size="10.00">anvi_run_centrifuge</text>
</g>
<!-- 1&#45;&gt;26 -->
<g id="edge39" class="edge"><title>1&#45;&gt;26</title>
<path fill="none" stroke="grey" stroke-width="2" d="M376.591,-359.871C389.888,-335.35 414.462,-290.032 430.064,-261.259"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="433.292,-262.648 434.982,-252.189 427.138,-259.312 433.292,-262.648"/>
</g>
<!-- 28 -->
<g id="node29" class="node"><title>28</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" d="M353.007,-180C353.007,-180 313.599,-180 313.599,-180 307.599,-180 301.599,-174 301.599,-168 301.599,-168 301.599,-156 301.599,-156 301.599,-150 307.599,-144 313.599,-144 313.599,-144 353.007,-144 353.007,-144 359.007,-144 365.007,-150 365.007,-156 365.007,-156 365.007,-168 365.007,-168 365.007,-174 359.007,-180 353.007,-180"/>
<text text-anchor="middle" x="333.303" y="-159" font-family="sans" font-size="10.00">anvi_merge</text>
</g>
<!-- 1&#45;&gt;28 -->
<g id="edge44" class="edge"><title>1&#45;&gt;28</title>
<path fill="none" stroke="grey" stroke-width="2" d="M366.182,-359.94C364.042,-330.397 358.641,-267.894 348.303,-216 346.576,-207.332 344.141,-198.015 341.734,-189.647"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="345.075,-188.601 338.862,-180.018 338.367,-190.602 345.075,-188.601"/>
</g>
<!-- 29 -->
<g id="node30" class="node"><title>29</title>
<path fill="none" stroke="#5682d8" stroke-width="2" d="M327.797,-252C327.797,-252 270.809,-252 270.809,-252 264.809,-252 258.809,-246 258.809,-240 258.809,-240 258.809,-228 258.809,-228 258.809,-222 264.809,-216 270.809,-216 270.809,-216 327.797,-216 327.797,-216 333.797,-216 339.797,-222 339.797,-228 339.797,-228 339.797,-240 339.797,-240 339.797,-246 333.797,-252 327.797,-252"/>
<text text-anchor="middle" x="299.303" y="-231" font-family="sans" font-size="10.00">anvi_run_hmms</text>
</g>
<!-- 1&#45;&gt;29 -->
<g id="edge47" class="edge"><title>1&#45;&gt;29</title>
<path fill="none" stroke="grey" stroke-width="2" d="M359.101,-359.871C347.358,-335.35 325.656,-290.032 311.878,-261.259"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="315.01,-259.697 307.534,-252.189 308.697,-262.72 315.01,-259.697"/>
</g>
<!-- 2 -->
<g id="node3" class="node"><title>2</title>
<path fill="none" stroke="#59d856" stroke-width="2" d="M1211.86,-396C1211.86,-396 1164.75,-396 1164.75,-396 1158.75,-396 1152.75,-390 1152.75,-384 1152.75,-384 1152.75,-372 1152.75,-372 1152.75,-366 1158.75,-360 1164.75,-360 1164.75,-360 1211.86,-360 1211.86,-360 1217.86,-360 1223.86,-366 1223.86,-372 1223.86,-372 1223.86,-384 1223.86,-384 1223.86,-390 1217.86,-396 1211.86,-396"/>
<text text-anchor="middle" x="1188.3" y="-375" font-family="sans" font-size="10.00">samtools_sort</text>
</g>
<!-- 3 -->
<g id="node4" class="node"><title>3</title>
<path fill="none" stroke="#d6d856" stroke-width="2" d="M1215.58,-324C1215.58,-324 1161.03,-324 1161.03,-324 1155.03,-324 1149.03,-318 1149.03,-312 1149.03,-312 1149.03,-300 1149.03,-300 1149.03,-294 1155.03,-288 1161.03,-288 1161.03,-288 1215.58,-288 1215.58,-288 1221.58,-288 1227.58,-294 1227.58,-300 1227.58,-300 1227.58,-312 1227.58,-312 1227.58,-318 1221.58,-324 1215.58,-324"/>
<text text-anchor="middle" x="1188.3" y="-303" font-family="sans" font-size="10.00">samtools_index</text>
</g>
<!-- 2&#45;&gt;3 -->
<g id="edge7" class="edge"><title>2&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1188.3,-359.697C1188.3,-351.983 1188.3,-342.712 1188.3,-334.112"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1191.8,-334.104 1188.3,-324.104 1184.8,-334.104 1191.8,-334.104"/>
</g>
<!-- 16 -->
<g id="node17" class="node"><title>16</title>
<path fill="none" stroke="#80d856" stroke-width="2" d="M1185.68,-252C1185.68,-252 1144.93,-252 1144.93,-252 1138.93,-252 1132.93,-246 1132.93,-240 1132.93,-240 1132.93,-228 1132.93,-228 1132.93,-222 1138.93,-216 1144.93,-216 1144.93,-216 1185.68,-216 1185.68,-216 1191.68,-216 1197.68,-222 1197.68,-228 1197.68,-228 1197.68,-240 1197.68,-240 1197.68,-246 1191.68,-252 1185.68,-252"/>
<text text-anchor="middle" x="1165.3" y="-231" font-family="sans" font-size="10.00">anvi_profile</text>
</g>
<!-- 2&#45;&gt;16 -->
<g id="edge26" class="edge"><title>2&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1210.01,-359.787C1220.06,-350.414 1230.94,-337.9 1236.3,-324 1242.06,-309.071 1243.47,-302.303 1236.3,-288 1229.76,-274.944 1218.3,-264.281 1206.47,-256.033"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1208.16,-252.955 1197.86,-250.454 1204.35,-258.829 1208.16,-252.955"/>
</g>
<!-- 3&#45;&gt;16 -->
<g id="edge28" class="edge"><title>3&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1182.62,-287.697C1180.06,-279.898 1176.97,-270.509 1174.12,-261.829"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1177.37,-260.512 1170.92,-252.104 1170.72,-262.697 1177.37,-260.512"/>
</g>
<!-- 27 -->
<g id="node28" class="node"><title>27</title>
<path fill="none" stroke="#d88556" stroke-width="2" d="M691.303,-36C691.303,-36 661.303,-36 661.303,-36 655.303,-36 649.303,-30 649.303,-24 649.303,-24 649.303,-12 649.303,-12 649.303,-6 655.303,-0 661.303,-0 661.303,-0 691.303,-0 691.303,-0 697.303,-0 703.303,-6 703.303,-12 703.303,-12 703.303,-24 703.303,-24 703.303,-30 697.303,-36 691.303,-36"/>
<text text-anchor="middle" x="676.303" y="-15" font-family="sans" font-size="10.00">all</text>
</g>
<!-- 4&#45;&gt;27 -->
<g id="edge41" class="edge"><title>4&#45;&gt;27</title>
<path fill="none" stroke="grey" stroke-width="2" d="M596.989,-71.8761C610.591,-62.8083 627.475,-51.5523 642.164,-41.7592"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="644.139,-44.649 650.518,-36.1898 640.256,-38.8246 644.139,-44.649"/>
</g>
<!-- 5 -->
<g id="node6" class="node"><title>5</title>
<path fill="none" stroke="#80d856" stroke-width="2" d="M733.676,-252C733.676,-252 692.93,-252 692.93,-252 686.93,-252 680.93,-246 680.93,-240 680.93,-240 680.93,-228 680.93,-228 680.93,-222 686.93,-216 692.93,-216 692.93,-216 733.676,-216 733.676,-216 739.676,-216 745.676,-222 745.676,-228 745.676,-228 745.676,-240 745.676,-240 745.676,-246 739.676,-252 733.676,-252"/>
<text text-anchor="middle" x="713.303" y="-231" font-family="sans" font-size="10.00">anvi_profile</text>
</g>
<!-- 5&#45;&gt;0 -->
<g id="edge2" class="edge"><title>5&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M745.816,-224.346C793.488,-211.658 882.357,-188.005 934.721,-174.067"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="935.921,-177.37 944.684,-171.416 934.12,-170.606 935.921,-177.37"/>
</g>
<!-- 6 -->
<g id="node7" class="node"><title>6</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" d="M907.771,-324C907.771,-324 820.835,-324 820.835,-324 814.835,-324 808.835,-318 808.835,-312 808.835,-312 808.835,-300 808.835,-300 808.835,-294 814.835,-288 820.835,-288 820.835,-288 907.771,-288 907.771,-288 913.771,-288 919.771,-294 919.771,-300 919.771,-300 919.771,-312 919.771,-312 919.771,-318 913.771,-324 907.771,-324"/>
<text text-anchor="middle" x="864.303" y="-303" font-family="sans" font-size="10.00">anvi_export_gene_calls</text>
</g>
<!-- 13 -->
<g id="node14" class="node"><title>13</title>
<path fill="none" stroke="#56d8d8" stroke-width="2" d="M974.883,-252C974.883,-252 901.723,-252 901.723,-252 895.723,-252 889.723,-246 889.723,-240 889.723,-240 889.723,-228 889.723,-228 889.723,-222 895.723,-216 901.723,-216 901.723,-216 974.883,-216 974.883,-216 980.883,-216 986.883,-222 986.883,-228 986.883,-228 986.883,-240 986.883,-240 986.883,-246 980.883,-252 974.883,-252"/>
<text text-anchor="middle" x="938.303" y="-231" font-family="sans" font-size="10.00">anvi_run_centrifuge</text>
</g>
<!-- 6&#45;&gt;13 -->
<g id="edge23" class="edge"><title>6&#45;&gt;13</title>
<path fill="none" stroke="grey" stroke-width="2" d="M882.595,-287.697C891.736,-279.05 902.943,-268.449 912.903,-259.027"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="915.362,-261.519 920.221,-252.104 910.551,-256.434 915.362,-261.519"/>
</g>
<!-- 7&#45;&gt;26 -->
<g id="edge38" class="edge"><title>7&#45;&gt;26</title>
<path fill="none" stroke="grey" stroke-width="2" d="M477.427,-287.697C472.311,-279.559 466.108,-269.689 460.458,-260.701"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="463.339,-258.708 455.054,-252.104 457.413,-262.433 463.339,-258.708"/>
</g>
<!-- 8 -->
<g id="node9" class="node"><title>8</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M1112.74,-468C1112.74,-468 1065.87,-468 1065.87,-468 1059.87,-468 1053.87,-462 1053.87,-456 1053.87,-456 1053.87,-444 1053.87,-444 1053.87,-438 1059.87,-432 1065.87,-432 1065.87,-432 1112.74,-432 1112.74,-432 1118.74,-432 1124.74,-438 1124.74,-444 1124.74,-444 1124.74,-456 1124.74,-456 1124.74,-462 1118.74,-468 1112.74,-468"/>
<text text-anchor="middle" x="1089.3" y="-453" font-family="sans" font-size="10.00">bowtie2_map</text>
<text text-anchor="middle" x="1089.3" y="-441" font-family="sans" font-size="10.00">sample: A</text>
</g>
<!-- 8&#45;&gt;2 -->
<g id="edge6" class="edge"><title>8&#45;&gt;2</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1113.52,-431.876C1126.23,-422.893 1141.97,-411.763 1155.73,-402.034"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1157.85,-404.821 1163.99,-396.19 1153.81,-399.105 1157.85,-404.821"/>
</g>
<!-- 9 -->
<g id="node10" class="node"><title>9</title>
<path fill="none" stroke="#d6d856" stroke-width="2" d="M213.575,-324C213.575,-324 159.031,-324 159.031,-324 153.031,-324 147.031,-318 147.031,-312 147.031,-312 147.031,-300 147.031,-300 147.031,-294 153.031,-288 159.031,-288 159.031,-288 213.575,-288 213.575,-288 219.575,-288 225.575,-294 225.575,-300 225.575,-300 225.575,-312 225.575,-312 225.575,-318 219.575,-324 213.575,-324"/>
<text text-anchor="middle" x="186.303" y="-303" font-family="sans" font-size="10.00">samtools_index</text>
</g>
<!-- 9&#45;&gt;11 -->
<g id="edge18" class="edge"><title>9&#45;&gt;11</title>
<path fill="none" stroke="grey" stroke-width="2" d="M189.022,-287.697C190.234,-279.983 191.691,-270.712 193.042,-262.112"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="196.52,-262.526 194.615,-252.104 189.605,-261.44 196.52,-262.526"/>
</g>
<!-- 10 -->
<g id="node11" class="node"><title>10</title>
<path fill="none" stroke="#d6d856" stroke-width="2" d="M665.575,-324C665.575,-324 611.031,-324 611.031,-324 605.031,-324 599.031,-318 599.031,-312 599.031,-312 599.031,-300 599.031,-300 599.031,-294 605.031,-288 611.031,-288 611.031,-288 665.575,-288 665.575,-288 671.575,-288 677.575,-294 677.575,-300 677.575,-300 677.575,-312 677.575,-312 677.575,-318 671.575,-324 665.575,-324"/>
<text text-anchor="middle" x="638.303" y="-303" font-family="sans" font-size="10.00">samtools_index</text>
</g>
<!-- 10&#45;&gt;5 -->
<g id="edge10" class="edge"><title>10&#45;&gt;5</title>
<path fill="none" stroke="grey" stroke-width="2" d="M656.842,-287.697C666.106,-279.05 677.465,-268.449 687.56,-259.027"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="690.054,-261.486 694.977,-252.104 685.278,-256.369 690.054,-261.486"/>
</g>
<!-- 11&#45;&gt;28 -->
<g id="edge42" class="edge"><title>11&#45;&gt;28</title>
<path fill="none" stroke="grey" stroke-width="2" d="M229.878,-216.233C248.687,-206.553 272.511,-194.29 292.553,-183.975"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="294.173,-187.077 301.463,-179.388 290.97,-180.853 294.173,-187.077"/>
</g>
<!-- 12 -->
<g id="node13" class="node"><title>12</title>
<path fill="none" stroke="#59d856" stroke-width="2" d="M64.8554,-396C64.8554,-396 17.7506,-396 17.7506,-396 11.7506,-396 5.75062,-390 5.75062,-384 5.75062,-384 5.75062,-372 5.75062,-372 5.75062,-366 11.7506,-360 17.7506,-360 17.7506,-360 64.8554,-360 64.8554,-360 70.8554,-360 76.8554,-366 76.8554,-372 76.8554,-372 76.8554,-384 76.8554,-384 76.8554,-390 70.8554,-396 64.8554,-396"/>
<text text-anchor="middle" x="41.303" y="-375" font-family="sans" font-size="10.00">samtools_sort</text>
</g>
<!-- 12&#45;&gt;23 -->
<g id="edge34" class="edge"><title>12&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M25.2665,-359.902C10.2464,-341.708 -8.16226,-312.26 4.30302,-288 11.4031,-274.182 23.9634,-263.16 36.7431,-254.825"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="38.822,-257.658 45.5612,-249.483 35.1948,-251.671 38.822,-257.658"/>
</g>
<!-- 30 -->
<g id="node31" class="node"><title>30</title>
<path fill="none" stroke="#d6d856" stroke-width="2" d="M79.5753,-324C79.5753,-324 25.0307,-324 25.0307,-324 19.0307,-324 13.0307,-318 13.0307,-312 13.0307,-312 13.0307,-300 13.0307,-300 13.0307,-294 19.0307,-288 25.0307,-288 25.0307,-288 79.5753,-288 79.5753,-288 85.5753,-288 91.5753,-294 91.5753,-300 91.5753,-300 91.5753,-312 91.5753,-312 91.5753,-318 85.5753,-324 79.5753,-324"/>
<text text-anchor="middle" x="52.303" y="-303" font-family="sans" font-size="10.00">samtools_index</text>
</g>
<!-- 12&#45;&gt;30 -->
<g id="edge48" class="edge"><title>12&#45;&gt;30</title>
<path fill="none" stroke="grey" stroke-width="2" d="M44.0221,-359.697C45.2343,-351.983 46.6911,-342.712 48.0425,-334.112"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="51.5203,-334.526 49.6152,-324.104 44.6052,-333.44 51.5203,-334.526"/>
</g>
<!-- 13&#45;&gt;0 -->
<g id="edge3" class="edge"><title>13&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M947.696,-215.697C952.068,-207.644 957.36,-197.894 962.198,-188.982"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="965.323,-190.563 967.018,-180.104 959.171,-187.223 965.323,-190.563"/>
</g>
<!-- 14 -->
<g id="node15" class="node"><title>14</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M827.738,-468C827.738,-468 780.868,-468 780.868,-468 774.868,-468 768.868,-462 768.868,-456 768.868,-456 768.868,-444 768.868,-444 768.868,-438 774.868,-432 780.868,-432 780.868,-432 827.738,-432 827.738,-432 833.738,-432 839.738,-438 839.738,-444 839.738,-444 839.738,-456 839.738,-456 839.738,-462 833.738,-468 827.738,-468"/>
<text text-anchor="middle" x="804.303" y="-453" font-family="sans" font-size="10.00">bowtie2_map</text>
<text text-anchor="middle" x="804.303" y="-441" font-family="sans" font-size="10.00">sample: B</text>
</g>
<!-- 18 -->
<g id="node19" class="node"><title>18</title>
<path fill="none" stroke="#59d856" stroke-width="2" d="M728.855,-396C728.855,-396 681.751,-396 681.751,-396 675.751,-396 669.751,-390 669.751,-384 669.751,-384 669.751,-372 669.751,-372 669.751,-366 675.751,-360 681.751,-360 681.751,-360 728.855,-360 728.855,-360 734.855,-360 740.855,-366 740.855,-372 740.855,-372 740.855,-384 740.855,-384 740.855,-390 734.855,-396 728.855,-396"/>
<text text-anchor="middle" x="705.303" y="-375" font-family="sans" font-size="10.00">samtools_sort</text>
</g>
<!-- 14&#45;&gt;18 -->
<g id="edge29" class="edge"><title>14&#45;&gt;18</title>
<path fill="none" stroke="grey" stroke-width="2" d="M780.085,-431.876C767.38,-422.893 751.639,-411.763 737.88,-402.034"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="739.8,-399.105 729.614,-396.19 735.759,-404.821 739.8,-399.105"/>
</g>
<!-- 15 -->
<g id="node16" class="node"><title>15</title>
<path fill="none" stroke="#59d856" stroke-width="2" d="M154.855,-396C154.855,-396 107.751,-396 107.751,-396 101.751,-396 95.7506,-390 95.7506,-384 95.7506,-384 95.7506,-372 95.7506,-372 95.7506,-366 101.751,-360 107.751,-360 107.751,-360 154.855,-360 154.855,-360 160.855,-360 166.855,-366 166.855,-372 166.855,-372 166.855,-384 166.855,-384 166.855,-390 160.855,-396 154.855,-396"/>
<text text-anchor="middle" x="131.303" y="-375" font-family="sans" font-size="10.00">samtools_sort</text>
</g>
<!-- 15&#45;&gt;9 -->
<g id="edge16" class="edge"><title>15&#45;&gt;9</title>
<path fill="none" stroke="grey" stroke-width="2" d="M144.899,-359.697C151.426,-351.389 159.371,-341.277 166.55,-332.141"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="169.438,-334.13 172.864,-324.104 163.934,-329.805 169.438,-334.13"/>
</g>
<!-- 15&#45;&gt;11 -->
<g id="edge20" class="edge"><title>15&#45;&gt;11</title>
<path fill="none" stroke="grey" stroke-width="2" d="M129.035,-359.95C127.345,-341.274 126.979,-310.93 138.303,-288 143.876,-276.715 152.991,-266.732 162.408,-258.56"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="164.765,-261.155 170.319,-252.132 160.35,-255.722 164.765,-261.155"/>
</g>
<!-- 16&#45;&gt;0 -->
<g id="edge5" class="edge"><title>16&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1132.81,-220.967C1101.02,-209.19 1052.45,-191.203 1017.86,-178.392"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1018.65,-174.951 1008.05,-174.76 1016.22,-181.515 1018.65,-174.951"/>
</g>
<!-- 17 -->
<g id="node18" class="node"><title>17</title>
<path fill="none" stroke="#56d882" stroke-width="2" d="M112.238,-540C112.238,-540 60.3678,-540 60.3678,-540 54.3678,-540 48.3678,-534 48.3678,-528 48.3678,-528 48.3678,-516 48.3678,-516 48.3678,-510 54.3678,-504 60.3678,-504 60.3678,-504 112.238,-504 112.238,-504 118.238,-504 124.238,-510 124.238,-516 124.238,-516 124.238,-528 124.238,-528 124.238,-534 118.238,-540 112.238,-540"/>
<text text-anchor="middle" x="86.303" y="-525" font-family="sans" font-size="10.00">bowtie2_index</text>
<text text-anchor="middle" x="86.303" y="-513" font-family="sans" font-size="10.00">assembly: X</text>
</g>
<!-- 21 -->
<g id="node22" class="node"><title>21</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M153.738,-468C153.738,-468 106.868,-468 106.868,-468 100.868,-468 94.8677,-462 94.8677,-456 94.8677,-456 94.8677,-444 94.8677,-444 94.8677,-438 100.868,-432 106.868,-432 106.868,-432 153.738,-432 153.738,-432 159.738,-432 165.738,-438 165.738,-444 165.738,-444 165.738,-456 165.738,-456 165.738,-462 159.738,-468 153.738,-468"/>
<text text-anchor="middle" x="130.303" y="-453" font-family="sans" font-size="10.00">bowtie2_map</text>
<text text-anchor="middle" x="130.303" y="-441" font-family="sans" font-size="10.00">sample: A</text>
</g>
<!-- 17&#45;&gt;21 -->
<g id="edge33" class="edge"><title>17&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M97.1794,-503.697C102.295,-495.559 108.498,-485.689 114.148,-476.701"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="117.193,-478.433 119.552,-468.104 111.267,-474.708 117.193,-478.433"/>
</g>
<!-- 25 -->
<g id="node26" class="node"><title>25</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M65.7384,-468C65.7384,-468 18.8677,-468 18.8677,-468 12.8677,-468 6.86767,-462 6.86767,-456 6.86767,-456 6.86767,-444 6.86767,-444 6.86767,-438 12.8677,-432 18.8677,-432 18.8677,-432 65.7384,-432 65.7384,-432 71.7384,-432 77.7384,-438 77.7384,-444 77.7384,-444 77.7384,-456 77.7384,-456 77.7384,-462 71.7384,-468 65.7384,-468"/>
<text text-anchor="middle" x="42.303" y="-453" font-family="sans" font-size="10.00">bowtie2_map</text>
<text text-anchor="middle" x="42.303" y="-441" font-family="sans" font-size="10.00">sample: B</text>
</g>
<!-- 17&#45;&gt;25 -->
<g id="edge37" class="edge"><title>17&#45;&gt;25</title>
<path fill="none" stroke="grey" stroke-width="2" d="M75.4266,-503.697C70.3115,-495.559 64.1076,-485.689 58.4581,-476.701"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="61.3393,-474.708 53.0543,-468.104 55.4128,-478.433 61.3393,-474.708"/>
</g>
<!-- 18&#45;&gt;5 -->
<g id="edge11" class="edge"><title>18&#45;&gt;5</title>
<path fill="none" stroke="grey" stroke-width="2" d="M706.268,-359.871C707.631,-335.67 710.136,-291.211 711.76,-262.393"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="715.266,-262.37 712.335,-252.189 708.278,-261.977 715.266,-262.37"/>
</g>
<!-- 18&#45;&gt;10 -->
<g id="edge17" class="edge"><title>18&#45;&gt;10</title>
<path fill="none" stroke="grey" stroke-width="2" d="M688.741,-359.697C680.628,-351.22 670.715,-340.864 661.832,-331.583"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="664.117,-328.908 654.674,-324.104 659.06,-333.749 664.117,-328.908"/>
</g>
<!-- 19 -->
<g id="node20" class="node"><title>19</title>
<path fill="none" stroke="#5682d8" stroke-width="2" d="M1043.8,-324C1043.8,-324 986.809,-324 986.809,-324 980.809,-324 974.809,-318 974.809,-312 974.809,-312 974.809,-300 974.809,-300 974.809,-294 980.809,-288 986.809,-288 986.809,-288 1043.8,-288 1043.8,-288 1049.8,-288 1055.8,-294 1055.8,-300 1055.8,-300 1055.8,-312 1055.8,-312 1055.8,-318 1049.8,-324 1043.8,-324"/>
<text text-anchor="middle" x="1015.3" y="-303" font-family="sans" font-size="10.00">anvi_run_hmms</text>
</g>
<!-- 19&#45;&gt;0 -->
<g id="edge1" class="edge"><title>19&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1012.42,-287.747C1009.21,-269.675 1003.51,-240.559 996.303,-216 993.782,-207.413 990.526,-198.234 987.376,-189.968"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="990.55,-188.475 983.643,-180.441 984.033,-191.029 990.55,-188.475"/>
</g>
<!-- 20&#45;&gt;27 -->
<g id="edge40" class="edge"><title>20&#45;&gt;27</title>
<path fill="none" stroke="grey" stroke-width="2" d="M755.617,-71.8761C742.016,-62.8083 725.132,-51.5523 710.442,-41.7592"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="712.35,-38.8246 702.088,-36.1898 708.467,-44.649 712.35,-38.8246"/>
</g>
<!-- 21&#45;&gt;15 -->
<g id="edge25" class="edge"><title>21&#45;&gt;15</title>
<path fill="none" stroke="grey" stroke-width="2" d="M130.55,-431.697C130.66,-423.983 130.793,-414.712 130.916,-406.112"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="134.415,-406.153 131.059,-396.104 127.416,-406.053 134.415,-406.153"/>
</g>
<!-- 22 -->
<g id="node23" class="node"><title>22</title>
<path fill="none" stroke="#56d882" stroke-width="2" d="M972.238,-540C972.238,-540 920.368,-540 920.368,-540 914.368,-540 908.368,-534 908.368,-528 908.368,-528 908.368,-516 908.368,-516 908.368,-510 914.368,-504 920.368,-504 920.368,-504 972.238,-504 972.238,-504 978.238,-504 984.238,-510 984.238,-516 984.238,-516 984.238,-528 984.238,-528 984.238,-534 978.238,-540 972.238,-540"/>
<text text-anchor="middle" x="946.303" y="-525" font-family="sans" font-size="10.00">bowtie2_index</text>
<text text-anchor="middle" x="946.303" y="-513" font-family="sans" font-size="10.00">assembly: Y</text>
</g>
<!-- 22&#45;&gt;8 -->
<g id="edge15" class="edge"><title>22&#45;&gt;8</title>
<path fill="none" stroke="grey" stroke-width="2" d="M981.285,-503.876C1000.5,-494.469 1024.53,-482.708 1045.04,-472.667"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1046.74,-475.73 1054.19,-468.19 1043.67,-469.443 1046.74,-475.73"/>
</g>
<!-- 22&#45;&gt;14 -->
<g id="edge24" class="edge"><title>22&#45;&gt;14</title>
<path fill="none" stroke="grey" stroke-width="2" d="M911.566,-503.876C892.484,-494.469 868.624,-482.708 848.256,-472.667"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="849.691,-469.472 839.174,-468.19 846.596,-475.751 849.691,-469.472"/>
</g>
<!-- 23&#45;&gt;28 -->
<g id="edge45" class="edge"><title>23&#45;&gt;28</title>
<path fill="none" stroke="grey" stroke-width="2" d="M110.858,-224.063C156.832,-211.443 240.803,-188.392 291.387,-174.506"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="292.626,-177.796 301.343,-171.773 290.773,-171.045 292.626,-177.796"/>
</g>
<!-- 24 -->
<g id="node25" class="node"><title>24</title>
<path fill="none" stroke="#afd856" stroke-width="2" d="M998.27,-396C998.27,-396 896.336,-396 896.336,-396 890.336,-396 884.336,-390 884.336,-384 884.336,-384 884.336,-372 884.336,-372 884.336,-366 890.336,-360 896.336,-360 896.336,-360 998.27,-360 998.27,-360 1004.27,-360 1010.27,-366 1010.27,-372 1010.27,-372 1010.27,-384 1010.27,-384 1010.27,-390 1004.27,-396 998.27,-396"/>
<text text-anchor="middle" x="947.303" y="-381" font-family="sans" font-size="10.00">anvi_gen_contigs_database</text>
<text text-anchor="middle" x="947.303" y="-369" font-family="sans" font-size="10.00">assembly: Y</text>
</g>
<!-- 24&#45;&gt;0 -->
<g id="edge4" class="edge"><title>24&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1010.31,-363.173C1031.11,-355.292 1052.04,-343.022 1064.3,-324 1094.56,-277.085 1042.15,-218.955 1006.08,-186.949"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1008.07,-184.045 998.218,-180.152 1003.49,-189.34 1008.07,-184.045"/>
</g>
<!-- 24&#45;&gt;5 -->
<g id="edge12" class="edge"><title>24&#45;&gt;5</title>
<path fill="none" stroke="grey" stroke-width="2" d="M884.23,-369.969C847.111,-363.193 800.994,-349.927 767.303,-324 746.473,-307.97 731.883,-281.431 723.165,-261.496"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="726.308,-259.939 719.247,-252.04 719.841,-262.618 726.308,-259.939"/>
</g>
<!-- 24&#45;&gt;6 -->
<g id="edge13" class="edge"><title>24&#45;&gt;6</title>
<path fill="none" stroke="grey" stroke-width="2" d="M926.786,-359.697C916.434,-350.965 903.717,-340.24 892.464,-330.75"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="894.485,-327.876 884.584,-324.104 889.972,-333.227 894.485,-327.876"/>
</g>
<!-- 24&#45;&gt;13 -->
<g id="edge22" class="edge"><title>24&#45;&gt;13</title>
<path fill="none" stroke="grey" stroke-width="2" d="M946.217,-359.871C944.684,-335.67 941.866,-291.211 940.039,-262.393"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="943.518,-261.948 939.392,-252.189 936.532,-262.391 943.518,-261.948"/>
</g>
<!-- 24&#45;&gt;16 -->
<g id="edge27" class="edge"><title>24&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1010.32,-363.483C1038.74,-355.28 1071.62,-342.687 1097.3,-324 1120.24,-307.309 1139.12,-280.736 1151.12,-260.966"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1154.25,-262.548 1156.29,-252.151 1148.21,-259.006 1154.25,-262.548"/>
</g>
<!-- 24&#45;&gt;19 -->
<g id="edge30" class="edge"><title>24&#45;&gt;19</title>
<path fill="none" stroke="grey" stroke-width="2" d="M964.112,-359.697C972.429,-351.135 982.608,-340.656 991.693,-331.304"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="994.23,-333.716 998.687,-324.104 989.209,-328.838 994.23,-333.716"/>
</g>
<!-- 24&#45;&gt;20 -->
<g id="edge32" class="edge"><title>24&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M884.045,-369.995C853.9,-363.228 820.166,-349.964 800.303,-324 753.745,-263.144 765.524,-165.326 774.918,-118.161"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="778.4,-118.609 777.041,-108.102 771.551,-117.164 778.4,-118.609"/>
</g>
<!-- 25&#45;&gt;12 -->
<g id="edge21" class="edge"><title>25&#45;&gt;12</title>
<path fill="none" stroke="grey" stroke-width="2" d="M42.0558,-431.697C41.9456,-423.983 41.8132,-414.712 41.6903,-406.112"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="45.19,-406.053 41.5474,-396.104 38.1907,-406.153 45.19,-406.053"/>
</g>
<!-- 26&#45;&gt;28 -->
<g id="edge46" class="edge"><title>26&#45;&gt;28</title>
<path fill="none" stroke="grey" stroke-width="2" d="M417.149,-215.876C402.77,-206.808 384.922,-195.552 369.393,-185.759"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="370.887,-182.564 360.561,-180.19 367.153,-188.484 370.887,-182.564"/>
</g>
<!-- 28&#45;&gt;4 -->
<g id="edge8" class="edge"><title>28&#45;&gt;4</title>
<path fill="none" stroke="grey" stroke-width="2" d="M364.908,-151.705C404.572,-140.038 473.108,-119.881 520.249,-106.016"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="521.359,-109.338 529.966,-103.158 519.384,-102.622 521.359,-109.338"/>
</g>
<!-- 29&#45;&gt;28 -->
<g id="edge43" class="edge"><title>29&#45;&gt;28</title>
<path fill="none" stroke="grey" stroke-width="2" d="M307.708,-215.697C311.578,-207.728 316.255,-198.1 320.546,-189.264"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="323.774,-190.629 324.995,-180.104 317.478,-187.57 323.774,-190.629"/>
</g>
<!-- 30&#45;&gt;23 -->
<g id="edge36" class="edge"><title>30&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M58.73,-287.697C61.6581,-279.813 65.19,-270.304 68.4429,-261.546"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="71.749,-262.697 71.95,-252.104 65.1871,-260.26 71.749,-262.697"/>
</g>
</g>
</svg>