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about.Rmd
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about.Rmd
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---
title: |
|
| About CilioGenics
output:
html_document:
theme: cerulean
---
## A Cilia Database
CilioGenics is an integrated and open source, community friendly database for ciliary genes. The key goal is to combine a variety of cilia-related data, including single-cell RNA-seq, comparative genomics, aggregation of gene list from cilia-related publications, protein atlas, proteomics, and cilia-specific motifs. Gene search is quick and user friendly, and it connects to a page devoted to the specific gene, which displays a variety of cilia-related information about that gene.
CilioGenics also provides a number of resources to:
- explore the evolutionary dynamics ( the comparative genomics) of each gene in the interactive heatmap
- explore the expression patterns of each gene (whole organisms in C. elegans, and lung tissue in human)
- view proteomics relationship between ciliary proteins and other proteins
- search for the name of gene in each cilia related publications
| <br/><br/>
## Update Policy of CilioGenics
Cilia are a complex organelle that possibly house hundreds of various proteins, and CilioGenics is a user-friendly database that aims to provide all existing knowledge about a gene. An automatic update is introduced into CilioGenics. For example, proteomics database BioGRID is automatically updated when a new update from BioGRID is released. However, since any effort to reveal the full constituents of cilia by one technique or a combination of two techniques is likely to fail to catch the entire ciliary genes and there will always new data about a gene, please help us to update the website if you have new data about a gene(s), as CilioGenics strives to incorporate new emerging data about each gene.
<br/><br/>
## Make a Contribution to CilioGenics
We would be glad if you would contribute to expanding and improving the CilioGenics database. Here are a few ways you can help CilioGenics:
- Submit a new paper presenting the ciliary gene list or single-cell RNA-seq paper.
Please submit a paper that is not currently in the CilioGenics collection, along with a brief description of the paper, such as a DOI for the paper and/or the integration table number. Please email us if you are willing to submit previously unpublished work.
- Update existing data on the CilioGenics
Please consider submitting a feedback if you find any missing or incorrect information.
<br/><br/>
## CilioGenics Version
CilioGenics is a dynamic and a constantly updated database, and if a major update is made, a new version of the database will be made available.
<br/><br/>
## Cookie Policy
We use cookies to recognize your device or browser to adjust the content accordingly.
<br/><br/>
## Contact
Please contact [oktay.kaplan\@agu.edu.tr](mailto:oktay.kaplan@agu.edu.tr) or [mustafapir29\@gmail.com](mailto:mustafapir29@gmail.com) for any question or inquiries.
<br/><br/>
## Source Code
For source code of the website: [thekaplanlab/CilioGenics-website (github.com)](https://github.com/thekaplanlab/CilioGenics-website)