setup.py

from setuptools import setup, find_packages

with open("README.md", "rt", encoding="utf-8") as fh:
    long_description_readme_md = fh.read()

with open("requirements.txt", "rt", encoding="utf-8") as fh:
    install_requirements_txt = [line.strip() for line in fh.readlines()]

setup(
    name='CellPhoneDB',
    author='TeichLab/VentoLab',
    author_email='contact@cellphonedb.org',
    version='3.0.0a7',
    description='Inferring cell-cell communication',
    long_description=long_description_readme_md,
    long_description_content_type='text/markdown',
    packages=find_packages(),
    include_package_data=True,
    zip_safe=False,
    maintainer='VentoLab',
    maintainer_email='contact@cellphonedb.org',
    url='https://cellphonedb.org',
    license='MIT',
    exclude_package_data={'': ['tools']},
    entry_points={
        'console_scripts':
            [
                'cellphonedb = cellphonedb.cellphonedb_cli:cli'
            ]
    },
    install_requires=install_requirements_txt,
)