Scripts developed to work with 10x Genomics sequencing results
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Updated
Sep 20, 2017 - R
Scripts developed to work with 10x Genomics sequencing results
A high performance TOML commenter and config file lifestyle
adtseq provides simple Rcpp methods to identify Antibody-Derived-Tags in single cell CITE/REAP-seq data
A repository to demo the `git bisect run` command
Pipeline to bin 10X, HiC, PacBio and ONT reads based on ancestry assemblies
shiny app for single cell RNAseq experiments, with plug-in like structure for flexible integration of tools and visualizations.
Phase two of the 10X HTML Form Endpoint investigation.
10x Phase 2 Investigation: Workshare Unemployment Program
Tigmint: Correct Misassemblies Using Linked Reads From Large Molecules
R package: {rfca} Random forest-based cell annotation methods for scRNAseq analysis. {rfca} contains methods which identifies cell types using machine learning trained on a diversity of cell types, without the need for a labelled training dataset. It also allows you to train your own cell prediction models with your own labels (cell type, subtyp…
CWL toolkit for single-cell sequencing data analysis
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
Laravel API boilerplate for 10-x developers!
Standalone tool and library allowing to work with barcoded linked-reads
Open-admin is a revamped fork of Laravel-admin, a popular Laravel open-source admin panel. It replaces outdated jQuery, integrates bootstrap 5, enhances code, and refines the interface for a modernized and effective solution.
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