NPMP 2017/18 - BIO seminar D master-slave flip-flop
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Updated
Jan 18, 2018 - Java
Biological Simulation is the use of computational and mathematical models to simulate biological systems. The underlying complexity of biology necessitates the development of efficient algorithms, knowledge representation methods, visualization techniques, data formats, and computational tools to observe the emergent behaviors of biological systems. The broad scope and variety of time-scales and space-scales requires development of community-driven standards and common formats to enable interoperability and reproducibility of models.
NPMP 2017/18 - BIO seminar D master-slave flip-flop
random walking mice
Model, configuration, data, analysis, and figures for Resource Abundance and the Critical Transition to Cooperation
An evolution simulation inspired by Biogenesis on Sourceforge.
Generator of chromosome sets based on the scientific concepts of human embryonic organism formation
Bottom-up dynamical modeling of biological systems using ordinary, partial, and stochastic differential equations.
A simple python web application modeling certain kind of gene transformations
cours VLC
Biological evolution simulator
A simulation of biological evolution using selection by traits caused by environmental factors. Shows an example of Hardy-Weinberg equilibrium. For AP Bio extra credit!
An object-oriented model of the workings of the human body written in java and scala
Simple console aplication for simulating grownig of populations in biology
Mimic the behaviors of biological neurons using pytorch
Modelling and Optimization of Models with a focus on Healthcare and Biological Networks
This project was developed as a personal research project after my Master's degree. It aims to explore the intersection of quantum biology and the effects of radiation on fungal species, leveraging advanced data analysis and simulation techniques.
The codes of Drylab Team, iGEM ITB 2017 to support the wetlab.
Cellular Potts Model implemented in C++
Supplementary information/data for Pritchard & Birch (2014) doi:10.1111/mpp.12210
Vim syntax for Kappa executable knowledge simulator