A simple ChRIS 'ds' app that copies the contents of the `input` directory to an `output` directory.

A ChRIS plugin app that can make multiple passes or runs of a certain Python Utility with different args.

A Chris 'fs' plugin app to copy file/folders from a directory into a Chris' feed.

A ChRIS DS plugin that can perform somewhat arbitrary (housekeeping) operations on patterns of input directories and files.

A quick "hack" plugin for freesurfer

Edit the values of a collection of user specified DICOM tags

ChRIS DS plugin for the pfdicom_tagExtract utility

Chris plugin app simpledsapp

An app to efficiently perform cortical parcellation and segmentation on raw brain MRI images

A simple ChRIS 'ts' app to copy filtered output directories from a list of input plugin instances

ChRIS plugin wrapper for ANTS N4BiasFieldCorrection

IRTK fetal brain MRI reconstruction. https://pubmed.ncbi.nlm.nih.gov/22939612/

Automatic masking of fetal brain images using deep learning

Extract surface meshes from in-utero MRI

A ChRIS plugin to convert `mgz` to `png` or `jpeg` which will also be useful in other project workflows

Quality Assessment tool for fetal brain MRIs, able to score each volume through a deep learning regression model. Developed using Python3 and Keras/Tensorflow framework.

A DS plugin to convert NIfTI input to DICOM output

Sample Application Plugin for Project ChRIS using Tensorflow

Count the number of positive-intensity voxels in a masked MRI reconstruction

A plugin to test Matrix Multiplication on ChRIS Platform