An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper
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Updated
Jul 8, 2024 - R
An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper
data and R code to reproduce the analysis and plots presented in the manuscript: "Macrophenological dynamics from citizen science plant occurrence data"
Spatial analysis and simulation of ecological communities
My personal repository
Ecologist interested in the different facets of diversity (taxonomic, functional, phylogenetic) and their link with community structure, environmental variability and ecosystem services. Strong experience in statistical modeling, multivariate analysis and large database mining in R.
Julia framework for spatial ecology - data types and utilities
Processing NEON soil microbe marker gene sequence data into ASV tables.
population and community dynamics on spatial graphs, in julia. (formerly EcoDynamics.jl)
Analysis of the Allen Coral Atlas database on shallow-water tropical reefs worldwide
Data, code & figures used to assess global patterns of potential thermal niche filling
For Macroecology class - a simple GLM approach to predict tree specie distribution based on environmental predictors.
Macroecological analyses of scorpion assemblages in Brazilian forests
neonMicrobe: Processing NEON soil microbe marker gene sequence data into ASV tables, duplicated from https://github.com/claraqin/neonMicrobe
Functions and types to access GBIF data from Julia
Open access repository for (some) data-sets, reproducible analyses, conference slides and manuscript for a publication based on my BSc Hons project (in press in Journal of Biogeography).
Paper - Best practices for building and curating databases for comparative analyses
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