A customizable pipeline for data extraction from MIMIC-IV.

Toolkit for evaluating and monitoring AI models in clinical settings

OMOP standardization pipeline for ICU databases

🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datasets, cohorts, prediction tasks, endpoints, preprocessing, and models. Paper: https://arxiv.org/abs/2306.05109

Code for the paper: Multi-Label Clinical Time-Series Generation via Conditional GAN (IEEE TKDE)

A toolkit for developing foundation models using Electronic Health Record (EHR) data.

Data Science & Machine Learning Project applied to Healthcare

[arXiv'24] The official implementation code of LEADER.

Research Methodology Project

Predicting length of stay in hospitals intensive care unit using MIMIC IV

Official repo for "Characterizing Stigmatizing Language in Medical Records" (ACL 2023)

Descriptive & prescriptive analysis of the effects of Vasoconstrictive medication via MIMIC's database using Targeted Maximum Likelihood Estimation for Causal Inference & ML techniques

mimic4fhir converts data from MIMIC IV database (PostgreSQL) to HL7 FHIR R4 resources or the German Medical Informatics Initiative core data sets.

Embeddings generation from MIMIC-IV and MIMIC-CXR

A CLI tool for extracting event logs out of MIMIC Databases.

SynthEHRella is a benchmarking package used for evaluating synthetic Electronic Health Records (EHR) data generation methods.

AIDx Model Development: Developing AI-driven models for healthcare applications.

TemporAI-MIVDP: Adaptation of MIMIC-IV-Data-Pipeline for TemporAI

Patient Discharge Classification based on the Hospital Treatment Process (ICPM 2021)

EHR data engineering using MIMIC-IV and K-MIMIC