PAR2 Activation and calcium signaling Reaction Model in PySB
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Updated
Feb 24, 2023 - Python
PAR2 Activation and calcium signaling Reaction Model in PySB
project about measuring size and shape of gold nanoparticles and nanorods and image segmantation
eNanoMapper TTL for ACS Nano paper
This repository contains examples of genetic algorithm optimisations using the Organisms program that can be run on Jupyter. This can be run either on your computer or live on the web through Binder
Depolarized Dynamic Light Scattering data analysis in python. Used to find aspect ratio of non-spherical nanoparticles using oblate, prolate, and cylinder methods.
The Nanocluster interpolation Scheme Program (NISP) is designed to perform an interpolation scheme that gives idea of the types of icosahedral, decahedral, and octahedral clusters that may exist at selected sizes.
Using deep learning methods to recognize and measure silica spheres in SEM pictures.
Repository for the KCN etching of gold nanorods paper
Scripts to compute field enhancements of plasmonic nanostrucutres, mirrored from https://gitlab.com/theoretical-chemistry-jena/quantum-dynamics/plasmonic-meep/
Produces neutralized nanoparticles (made up of Fe2O3 unit cells from the standard Fe2O3 .cif file) in .lmp format. Uses the Ovito python library to accomplish this.
DecomNano is a heterogeneity analysis of bimetallic nanoparticles using coordination numbers obtained from XAS analysis.
Semi-supervised VAE for data with the rotational disorder
Paper on how to supress background while imaging gold nanorods through the use of the anti-Stokes emission.
This is a computational exercise for learning about silver nanoprisms and why their colour is related to their diameter. Runs in Google Colab and uses Python3. Designed for high school students.
Analyze two-component nanoparticle properties for classical molecular dynamics simulations
PBPK Modeling For Therapeutic Nanoparticles Loaded With Drug
C++ template library for Discrete Element Method (DEM) simulations
High throughput analysis of NTA data to evaulate particle interaction. Also gives results of general NTA analysis
INSA 4GP Multi-Project Computer-Vision and Deep-Learning for NPs Identification and Classification
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