{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":430719486,"defaultBranch":"master","name":"TrackMate-Cellpose","ownerLogin":"trackmate-sc","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-11-22T13:32:56.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/112976566?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1720523859.0","currentOid":""},"activityList":{"items":[{"before":"e3853e633cd0037fb5ba645333bfd5aeec05cd7d","after":"534b449b68f18ff69bbe0bc4b3d0f6ac4bb5de87","ref":"refs/heads/omnipose","pushedAt":"2024-07-19T08:26:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Correct the link to the advanced omnipose detector wiki page.","shortMessageHtmlLink":"Correct the link to the advanced omnipose detector wiki page."}},{"before":"4255c7ff00c1d9a13b7d5a80a9006ea726b662a0","after":"e3853e633cd0037fb5ba645333bfd5aeec05cd7d","ref":"refs/heads/omnipose","pushedAt":"2024-07-16T12:14:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"marieanselmet","name":"Marie Anselmet","path":"/marieanselmet","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32811540?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"66538f8ef346e180600b005723514ae762d45221","after":"4255c7ff00c1d9a13b7d5a80a9006ea726b662a0","ref":"refs/heads/omnipose","pushedAt":"2024-07-16T12:14:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"marieanselmet","name":"Marie Anselmet","path":"/marieanselmet","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32811540?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"89cfeee10654badb53502329c5a5d19ae9b18893","after":"66538f8ef346e180600b005723514ae762d45221","ref":"refs/heads/omnipose","pushedAt":"2024-07-10T13:50:43.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Minor code style change.","shortMessageHtmlLink":"Minor code style change."}},{"before":"4f6070fad2f9cc40c36d491121303a30266c42b6","after":"89cfeee10654badb53502329c5a5d19ae9b18893","ref":"refs/heads/omnipose","pushedAt":"2024-07-09T16:37:07.000Z","pushType":"push","commitsCount":16,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Modifs to use custom models with omnipose version 1.0.6","shortMessageHtmlLink":"Modifs to use custom models with omnipose version 1.0.6"}},{"before":null,"after":"ad9615a844ddeb76243ae9d184c7b905276a6b6d","ref":"refs/heads/custom_models_omni","pushedAt":"2024-07-09T11:17:39.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"marieanselmet","name":"Marie Anselmet","path":"/marieanselmet","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32811540?s=80&v=4"},"commit":{"message":"Modifs to use custom models with omnipose version 1.0.6","shortMessageHtmlLink":"Modifs to use custom models with omnipose version 1.0.6"}},{"before":"7fd680068605191c9579f52ae254017bd9387b87","after":"4f6070fad2f9cc40c36d491121303a30266c42b6","ref":"refs/heads/omnipose","pushedAt":"2024-07-04T11:37:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Update deps, parent pom and target version.","shortMessageHtmlLink":"Update deps, parent pom and target version."}},{"before":null,"after":"7fd680068605191c9579f52ae254017bd9387b87","ref":"refs/heads/omnipose","pushedAt":"2024-07-03T15:07:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Gitignore IntelliJ files.","shortMessageHtmlLink":"Gitignore IntelliJ files."}},{"before":"bee1e32c0eed6e4d0d50237b082076cf89fb814a","after":"17c9ed907c3a757fb6e104e15b6485a846fc3135","ref":"refs/heads/v8","pushedAt":"2024-06-05T13:30:56.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Minor code style changes. No change on the UI.","shortMessageHtmlLink":"Minor code style changes. No change on the UI."}},{"before":"e9d0cd95d8addf7e3e1c97b905299177b167e3dc","after":null,"ref":"refs/heads/Omni_channels_modif","pushedAt":"2024-06-05T11:31:16.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"}},{"before":"aa8caedc0a92728f3f42c065745536a0da027c48","after":"bee1e32c0eed6e4d0d50237b082076cf89fb814a","ref":"refs/heads/v8","pushedAt":"2024-06-05T11:31:03.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Add nclasses arg and channel handling for omnipose advanced detector","shortMessageHtmlLink":"Add nclasses arg and channel handling for omnipose advanced detector"}},{"before":"a435bc07fcb590ac216884ceaa8c4d3bc5b42295","after":"e9d0cd95d8addf7e3e1c97b905299177b167e3dc","ref":"refs/heads/Omni_channels_modif","pushedAt":"2024-06-05T09:26:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"marieanselmet","name":"Marie Anselmet","path":"/marieanselmet","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32811540?s=80&v=4"},"commit":{"message":"Add nclasses arg and channel handling for omnipose advanced detector","shortMessageHtmlLink":"Add nclasses arg and channel handling for omnipose advanced detector"}},{"before":null,"after":"a435bc07fcb590ac216884ceaa8c4d3bc5b42295","ref":"refs/heads/Omni_channels_modif","pushedAt":"2024-06-05T09:19:23.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"marieanselmet","name":"Marie Anselmet","path":"/marieanselmet","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32811540?s=80&v=4"},"commit":{"message":"Add nclasses arg and channel handling for omnipose advanced detector","shortMessageHtmlLink":"Add nclasses arg and channel handling for omnipose advanced detector"}},{"before":"e7aac0f92e7a3917e82837130d5e44ba96c5d77b","after":"aa8caedc0a92728f3f42c065745536a0da027c48","ref":"refs/heads/v8","pushedAt":"2024-05-21T12:31:46.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Merge remote-tracking branch 'origin/master' into v8","shortMessageHtmlLink":"Merge remote-tracking branch 'origin/master' into v8"}},{"before":"0f359fa2e4f824fbc117c5b22f679adcdc46cc42","after":"e7aac0f92e7a3917e82837130d5e44ba96c5d77b","ref":"refs/heads/v8","pushedAt":"2024-03-28T14:51:18.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Put the config panels in a scrollpane.\n\nThere are too many options in the advanced detector to fit in with the\ndefault GUI size. The scroll bar does not appear if not needed.","shortMessageHtmlLink":"Put the config panels in a scrollpane."}},{"before":"8b266cad458e254c3d94b625c85443ca2a619461","after":"7fd680068605191c9579f52ae254017bd9387b87","ref":"refs/heads/master","pushedAt":"2024-03-10T10:44:10.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Gitignore IntelliJ files.","shortMessageHtmlLink":"Gitignore IntelliJ files."}},{"before":"d8340ca5ddaa44fb92e7d72684303ccfa6d28735","after":"0f359fa2e4f824fbc117c5b22f679adcdc46cc42","ref":"refs/heads/v8","pushedAt":"2024-03-03T10:54:50.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"change chanels handling, add min size","shortMessageHtmlLink":"change chanels handling, add min size"}},{"before":"ea65ba6d811080074730cda1bffde8d93fe98671","after":"d8340ca5ddaa44fb92e7d72684303ccfa6d28735","ref":"refs/heads/v8","pushedAt":"2024-02-05T16:38:57.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Update test classes.","shortMessageHtmlLink":"Update test classes."}},{"before":"0504bbcd0bc598d2c9645045989c170a90ceee78","after":"ea65ba6d811080074730cda1bffde8d93fe98671","ref":"refs/heads/v8","pushedAt":"2023-12-04T16:15:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Change factory priority to have consistent detector menu ordering.","shortMessageHtmlLink":"Change factory priority to have consistent detector menu ordering."}},{"before":"41188f3e67afa8cd3de94626b49d48f6ac45042e","after":"0504bbcd0bc598d2c9645045989c170a90ceee78","ref":"refs/heads/v8","pushedAt":"2023-11-28T15:18:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Capitalization weirdness fix.","shortMessageHtmlLink":"Capitalization weirdness fix."}},{"before":"74f066c1f127e504308495f8a4127872d1db65ec","after":"41188f3e67afa8cd3de94626b49d48f6ac45042e","ref":"refs/heads/v8","pushedAt":"2023-11-28T15:15:26.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Advanced version of the 2D+Z cellpose detector.","shortMessageHtmlLink":"Advanced version of the 2D+Z cellpose detector."}},{"before":"eaf0613df78a57f4296ed6600d027a4270ee8e7c","after":"74f066c1f127e504308495f8a4127872d1db65ec","ref":"refs/heads/v8","pushedAt":"2023-11-16T17:15:05.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"First version of a 2D+Z version of a 3D detector with cellpose.","shortMessageHtmlLink":"First version of a 2D+Z version of a 3D detector with cellpose."}},{"before":null,"after":"eaf0613df78a57f4296ed6600d027a4270ee8e7c","ref":"refs/heads/v8","pushedAt":"2023-11-06T16:06:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Update test drive.","shortMessageHtmlLink":"Update test drive."}},{"before":"7375bed29e0eb976b08ac03dead97a008f1af5d5","after":null,"ref":"refs/heads/advanced-config","pushedAt":"2023-11-06T12:35:21.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"}},{"before":"12e5b268a35bab56b487c27723164634c0e1e54c","after":"8b266cad458e254c3d94b625c85443ca2a619461","ref":"refs/heads/master","pushedAt":"2023-11-06T12:35:16.000Z","pushType":"pr_merge","commitsCount":9,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"An advanced version of the omnipose detector.\n\nWith a gotcha: omnipose is based on cellpose 1, so there is no\n'cellprob_threshld_ parameter, but 'mask_threshold' instead.","shortMessageHtmlLink":"An advanced version of the omnipose detector."}},{"before":"add958626495569b18c1db31b453ed2f4d95cdd6","after":"7375bed29e0eb976b08ac03dead97a008f1af5d5","ref":"refs/heads/advanced-config","pushedAt":"2023-11-06T12:31:59.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"An advanced version of the omnipose detector.\n\nWith a gotcha: omnipose is based on cellpose 1, so there is no\n'cellprob_threshld_ parameter, but 'mask_threshold' instead.","shortMessageHtmlLink":"An advanced version of the omnipose detector."}},{"before":"7b6833642a7f7e65091c72547b637ef8ed9d17b0","after":null,"ref":"refs/heads/omnipose","pushedAt":"2023-11-06T12:30:06.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"}},{"before":"9b7bb1108298fda5c0559d79d360479c7a0aa88a","after":"12e5b268a35bab56b487c27723164634c0e1e54c","ref":"refs/heads/master","pushedAt":"2023-11-06T12:30:02.000Z","pushType":"pr_merge","commitsCount":38,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"Merge pull request #8 from trackmate-sc/omnipose\n\nSupport Omnipose.","shortMessageHtmlLink":"Merge pull request #8 from trackmate-sc/omnipose"}},{"before":"508a09f5bab3de7a12c79b4f83d847551c37bcef","after":"7b6833642a7f7e65091c72547b637ef8ed9d17b0","ref":"refs/heads/omnipose","pushedAt":"2023-07-24T16:26:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"marieanselmet","name":"Marie Anselmet","path":"/marieanselmet","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/32811540?s=80&v=4"},"commit":{"message":"Update README.md\n\nAdding docu in the README","shortMessageHtmlLink":"Update README.md"}},{"before":null,"after":"add958626495569b18c1db31b453ed2f4d95cdd6","ref":"refs/heads/advanced-config","pushedAt":"2023-07-24T16:24:56.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"tinevez","name":"Jean-Yves Tinevez","path":"/tinevez","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3583203?s=80&v=4"},"commit":{"message":"An advanced version of the omnipose detector.\n\nWith a gotcha: omnipose is based on cellpose 1, so there is no\n'cellprob_threshld_ parameter, but 'mask_threshold' instead.","shortMessageHtmlLink":"An advanced version of the omnipose detector."}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0xOVQwODoyNjowNi4wMDAwMDBazwAAAASDsuzk","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wNy0yNFQxNjoyNDo1Ni4wMDAwMDBazwAAAANcAxAh"}},"title":"Activity ยท trackmate-sc/TrackMate-Cellpose"}