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bcftool error #586

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SaraRHenderson opened this issue Mar 28, 2024 · 1 comment
Open

bcftool error #586

SaraRHenderson opened this issue Mar 28, 2024 · 1 comment

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@SaraRHenderson
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I had the error with libtabixpp0, when I fixed this I seemed to loose bcftools. I have forced reinstall (bcftools and snippy) multiple times including downgrading but I keep coming back saying this error:

Need bcftools --version >= 1.7 but you have 0 - please upgrade it.

Any suggestions as to how to do this?

Thanks!

@ammaraziz
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Wild guess but try including conda-forge channel as well as bioconda when installing

conda install -c conda-forge -c bioconda snippy 

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