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DataAnalyticsEngineering · Oct 2, 2024 · 146efe2 · 146efe2
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diff --git a/data/figures/random_loading.pdf b/data/figures/random_loading.pdf
diff --git a/data/figures/rel_err_sig_10s.pdf b/data/figures/rel_err_sig_10s.pdf
diff --git a/data/figures/rel_err_sig_ftc_10s.pdf b/data/figures/rel_err_sig_ftc_10s.pdf
diff --git a/data/figures/surface_plots_err_sig_sig_ftc.pdf b/data/figures/surface_plots_err_sig_sig_ftc.pdf
diff --git a/data/figures/training_reproduction.pdf b/data/figures/training_reproduction.pdf
diff --git a/data/results/mat_parameters1.pdf b/data/results/mat_parameters1.pdf
diff --git a/data/results/mat_parameters2.pdf b/data/results/mat_parameters2.pdf
diff --git a/data/results/sig0_parameter.pdf b/data/results/sig0_parameter.pdf
diff --git a/docs/index.rst b/docs/index.rst
@@ -22,7 +22,7 @@ The new $\theta$-NTFA is then validated for various thermo-mechanical loadings a
 
 [1] S. Sharba, J. Herb, F. Fritzen, Reduced order homogenization of thermoelastic materials with strong temperature
 dependence and comparison to a machine-learned model, Archive of Applied Mechanics 93 (7) (2023) 2855–2876.
-doi: [10.1007/s00419-023-02411-6](https://doi.org/10.1007/s00419-023-02411-6)
+doi: :ref:`https://doi.org/10.1007/s00419-023-02411-6<10.1007/s00419-023-02411-6>`
 
 Features
 ^^^^^^^^

diff --git a/examples/generate_inputs.ipynb b/examples/generate_inputs.ipynb
diff --git a/examples/generate_inputs.py b/examples/generate_inputs.py
@@ -42,7 +42,7 @@
 
 # %%
 file_name = os.path.join(
-    data_path, "validation", "simple_3d_rve_B1-B6_16x16x16_100samples_fix.h5"
+    data_path, "ntfa_raw", "rve_thermoplastic_6loadings_10samples.h5"
 )
 group_name = "/ms_9p/dset0_sim"
 suffix = "_fix16_N24_100s"

diff --git a/examples/material_parameters.ipynb b/examples/material_parameters.ipynb
@@ -25,6 +25,9 @@
     "> Felix Fritzen is funded by the German Research Foundation (DFG) --\n",
     "> 390740016 (EXC-2075); 406068690 (FR2702/8-1); 517847245 (FR2702/10-1).\n",
     "\n",
+    "This notebook contains the temperature-dependent material parameters of copper (Cu) and\n",
+    "fused tungsten carbide (FTC) that are used in the examples of our CMAME article.\n",
+    "\n",
     "## Imports"
    ]
   },
@@ -90,7 +93,7 @@
    "id": "f719a870",
    "metadata": {},
    "source": [
-    "## Temperature-dependent material parameters of copper phase (phase no. 0)"
+    "## Temperature-dependent material parameters of copper (Cu) phase (phase no. 0)"
    ]
   },
   {
@@ -137,7 +140,7 @@
    "id": "49cccd0a",
    "metadata": {},
    "source": [
-    "## Temperature-dependent material parameters of wsc phase (phase no. 1)"
+    "## Temperature-dependent material parameters of wsc/FTC phase (phase no. 1)"
    ]
   },
   {

diff --git a/examples/material_parameters.py b/examples/material_parameters.py
@@ -19,6 +19,9 @@
 # > Felix Fritzen is funded by the German Research Foundation (DFG) --
 # > 390740016 (EXC-2075); 406068690 (FR2702/8-1); 517847245 (FR2702/10-1).
 #
+# This notebook contains the temperature-dependent material parameters of copper (Cu) and
+# fused tungsten carbide (FTC) that are used in the examples of our CMAME article.
+#
 # ## Imports
 
 # %%
@@ -44,7 +47,7 @@
 P2 = I4 - P1
 
 # %% [markdown]
-# ## Temperature-dependent material parameters of copper phase (phase no. 0)
+# ## Temperature-dependent material parameters of copper (Cu) phase (phase no. 0)
 
 # %%
 poisson_ratio_cu = lambda x: 3.40000e-01 * x**0
@@ -73,7 +76,7 @@
 # %%
 
 # %% [markdown]
-# ## Temperature-dependent material parameters of wsc phase (phase no. 1)
+# ## Temperature-dependent material parameters of wsc/FTC phase (phase no. 1)
 
 # %%
 poisson_ratio_wsc = lambda x: 2.80000e-01 * x**0

diff --git a/examples/reproduce_article.ipynb b/examples/reproduce_article.ipynb
@@ -25,6 +25,8 @@
     "> Felix Fritzen is funded by the German Research Foundation (DFG) --\n",
     "> 390740016 (EXC-2075); 406068690 (FR2702/8-1); 517847245 (FR2702/10-1).\n",
     "\n",
+    "This notebooks reproduces some results and plots from the examples of our CMAME article.\n",
+    "\n",
     "## Imports:"
    ]
   },
@@ -115,9 +117,7 @@
    },
    "outputs": [],
    "source": [
-    "mode_fn = os.path.join(\n",
-    "    data_path, \"ntfa_raw\", \"rve_thermoplastic_6loadings_10samples.h5\"\n",
-    ")\n",
+    "mode_fn = os.path.join(data_path, \"rve\", \"rve_thermoplastic_6loadings_10samples.h5\")\n",
     "A_bar = TabularInterpolation.from_h5(\n",
     "    mode_fn,\n",
     "    \"/ms_9p/dset0_ntfa/temperatures\",\n",

diff --git a/examples/reproduce_article.py b/examples/reproduce_article.py
@@ -34,6 +34,8 @@
 # > Felix Fritzen is funded by the German Research Foundation (DFG) --
 # > 390740016 (EXC-2075); 406068690 (FR2702/8-1); 517847245 (FR2702/10-1).
 #
+# This notebooks reproduces some results and plots from the examples of our CMAME article.
+#
 # ## Imports:
 
 # %%
@@ -102,9 +104,7 @@ def rel_error(A, A_ref, r_min=None):
 # - This also happens inside of the ThermoNTFA class during initialization
 
 # %%
-mode_fn = os.path.join(
-    data_path, "ntfa_raw", "rve_thermoplastic_6loadings_10samples.h5"
-)
+mode_fn = os.path.join(data_path, "rve", "rve_thermoplastic_6loadings_10samples.h5")
 A_bar = TabularInterpolation.from_h5(
     mode_fn,
     "/ms_9p/dset0_ntfa/temperatures",

diff --git a/examples/truncate_ntfa_modes.ipynb b/examples/truncate_ntfa_modes.ipynb
@@ -25,6 +25,8 @@
     "> Felix Fritzen is funded by the German Research Foundation (DFG) --\n",
     "> 390740016 (EXC-2075); 406068690 (FR2702/8-1); 517847245 (FR2702/10-1).\n",
     "\n",
+    "This notebook exemplifies how the NTFA modes can be truncated after computation.\n",
+    "\n",
     "## Imports"
    ]
   },
@@ -82,7 +84,7 @@
     }
    ],
    "source": [
-    "fname = os.path.join(data_path, \"ntfa_raw\", \"rve_thermoplastic_6loadings_10samples.h5\")\n",
+    "fname = os.path.join(data_path, \"rve\", \"rve_thermoplastic_6loadings_10samples.h5\")\n",
     "basename = \"/ms_9p/dset0_ntfa/\"\n",
     "\n",
     "F = h5py.File(fname, \"r\")\n",

diff --git a/examples/truncate_ntfa_modes.py b/examples/truncate_ntfa_modes.py
@@ -21,6 +21,8 @@
 # > Felix Fritzen is funded by the German Research Foundation (DFG) --
 # > 390740016 (EXC-2075); 406068690 (FR2702/8-1); 517847245 (FR2702/10-1).
 #
+# This notebook exemplifies how the NTFA modes can be truncated after computation.
+#
 # ## Imports
 
 # %%
@@ -33,7 +35,7 @@
 data_path = "../data"
 
 # %%
-fname = os.path.join(data_path, "ntfa_raw", "rve_thermoplastic_6loadings_10samples.h5")
+fname = os.path.join(data_path, "rve", "rve_thermoplastic_6loadings_10samples.h5")
 basename = "/ms_9p/dset0_ntfa/"
 
 F = h5py.File(fname, "r")