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Two small bugs#157

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scfurl wants to merge 48 commits intoGreenleafLab:masterGreenleafLab/ArchR:masterfrom scfurl:masterscfurl/ArchR:masterCopy head branch name to clipboard

+515-359

Commits

Commits on May 12, 2020

• change to paste in peakAnnoEnrichment

  jgranja24

  committed
  5386336

• bugfix

  jgranja24

  committed
  8c9e0bc

• include dot removal in correlate matrices

  jgranja24

  committed
  dfbd590

• update documentation

  jgranja24

  committed
  a0a2d10

• Update DESCRIPTION

  jgranja24

  committed
  2a16186

Commits on May 13, 2020

• bugfix returning 1 peak from peakset

  jgranja24

  committed
  9ad0c51

• add log messages to peak coaccessibility

  jgranja24

  committed
  dcf5c69

• check for space in output directory

  jgranja24

  committed
  ee7f521

• getTrajectory force class structure

  jgranja24

  committed
  f0b1c8d

• force trajectory between 0 and 100 and numeric

  jgranja24

  committed
  7011965

Commits on May 14, 2020

• update incase normQ is length 1

  jgranja24

  committed
  988ab93

• Update LoggerUtils.R

  jgranja24

  committed
  cb5572f

• disable chrPrefix

  jgranja24

  committed
  0660b4e

Commits on May 17, 2020

• fix to declare assay as an array

  scfurl

  committed
  6335e28

• add single quotes to allow unix mv to copy filenames with spaces

  scfurl

  committed
  bcbf41f

Commits on May 18, 2020

• fix for file paths containing spaces when calling macs2

  scfurl

  committed
  5f45317

• fixed system calls to macs2 where filenames have spaces

  scfurl

  committed
  2be85a2

Commits on May 27, 2020

• added projectData which projects single cells onto single cells

  scfurl

  committed
  3471c93

Commits on Jun 28, 2020

• nm

  scfurl

  committed
  799d296

• nm

  scfurl

  committed
  4bcb9bb

Commits on Jun 29, 2020

• allow spaces

  

  scfurl

  committed
  a417fc9

Commits on Jul 1, 2020

• bug in FilterCells saving date

  scfurl

  committed
  3be5d39

Commits on Jul 9, 2020

• Add exportMonocle3 function

  scfurl

  committed
  91910c1

Commits on Sep 1, 2020

• allow spaces

  scfurl

  committed
  271492d

Commits on Sep 3, 2020

• add featureDF to GRanges function

  scfurl

  committed
  57cf0b5

• Untrack files in .gitignore

  scfurl

  committed
  56a5dd1

• fixed Monocle3 export of GeneActivityMatrix

  scfurl

  committed
  57881be

• reorder seqlevels pulling from geneAnnotation slot

  scfurl

  committed
  627b7ba

Commits on Nov 11, 2020

• multiple arrows

  scfurl

  committed
  2534071

• Merge branch 'master' of https://github.com/scfurl/ArchR

  scfurl

  committed
  03b4ce7

• multiplearrows

  scfurl

  committed
  c48378a

• multiple arrows

  scfurl

  committed
  dbe56e7

• merging greanleaf version 1.0

  

  jgranja24

  authored and

  scfurl

  committed
  b1ee105

• resolve conflicts

  scfurl

  committed
  c5cf785

• catching up1

  scfurl

  committed
  f40483f

• Merge remote-tracking branch 'gleaf/master'

  scfurl

  committed
  96b8ebe

• updated finally

  scfurl

  committed
  784fac3

Commits on Nov 17, 2020

• unknown

  scfurl

  committed
  4e3695c

• Merge branch 'master' of https://github.com/scfurl/ArchR

  scfurl

  committed
  f0559fb

Commits on Nov 20, 2020

• bugfix

  

  scfurl

  committed
  110071a

Commits on Nov 23, 2020

• bugfix remove sys.time for weird error in R 4.0

  jgranja24

  committed
  40bede0

• bug fix new uwot save and loading features

  jgranja24

  committed
  4820aa7

• deprecated

  jgranja24

  committed
  523cc7c

• uwot_savebug

  

  scfurl

  committed
  c582e52

Commits on May 4, 2021

• update to 1.0.1

  

  jgranja24

  authored and

  scfurl

  committed
  a22aa29

• vb

  scfurl

  committed
  a83e23b

Commits on Oct 4, 2023

• Merge branch 'master' of https://github.com/GreenleafLab/ArchR into GreenleafLab-master

  scfurl

  committed
  a9aef7d

• Merge pull request #2 from scfurl/GreenleafLab-master

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  scfurl

  authored
  bafb605