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kjvbrt committed Jul 31, 2024
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2 changes: 1 addition & 1 deletion CONTRIBUTING.md
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Expand Up @@ -101,7 +101,7 @@ Software visit
[conduct]: CONDUCT.md
[license]: LICENSE.md
[issues]: https://github.com/HEP-FCC/fcc-tutorials/issues
[pro-git-chapter]: http://git-scm.com/book/en/v2/GitHub-Contributing-to-a-Project
[pro-git-chapter]: https://git-scm.com/book/en/v2/GitHub-Contributing-to-a-Project
[gh-fork]: https://help.github.com/en/articles/fork-a-repo
[gh-pull]: https://help.github.com/en/articles/about-pull-requests
[gh-fork-pull]: https://reflectoring.io/github-fork-and-pull/
2 changes: 1 addition & 1 deletion developing-fcc-software/FccSoftwareGit.md
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Expand Up @@ -11,7 +11,7 @@ code.
For a general introduction to git, have a look at these tutorials:

- [Atlassian tutorial](https://www.atlassian.com/git/tutorials/)
- [Interactive tutorial](http://pcottle.github.io/learnGitBranching/)
- [Interactive tutorial](https://pcottle.github.io/learnGitBranching/)
- [The git book](https://git-scm.com/book/en/v2)

## First time setup of git
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4 changes: 2 additions & 2 deletions fast-sim-and-analysis/EventProduction.md
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Expand Up @@ -181,12 +181,12 @@ Pythia8 card (in this case `p8_ee_default.cmd`), that does not include specific
decays nor specific matching/merging parameters.
:::

To assist you in writing your own Pythia8 configuration cards, the manual is available [here](http://home.thep.lu.se/~torbjorn/pythia81html/Welcome.html)
To assist you in writing your own Pythia8 configuration cards, the manual is available [here](https://pythia.org/latest-manual/Welcome.html)

## Expert mode

The following commands should be run with care, as they update the database, web-page etc...
They run automatically every four hours with crontab, thus you will eventually know when your samples are ready to be used by browsing the corresponding configuration on this [web-page](http://fcc-physics-events.web.cern.ch/).
They run automatically every four hours with crontab, thus you will eventually know when your samples are ready to be used by browsing the corresponding configuration on this [web-page](https://fcc-physics-events.web.cern.ch/).
The `--force` option is used to force the script to run in order to optimize running time, processes that have not been flagged will not be checked.

### Updating the database
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12 changes: 6 additions & 6 deletions fast-sim-and-analysis/FccFastSimGeneration.md
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Expand Up @@ -756,9 +756,9 @@ i.e. 1458.0 +- 7.7 pb.
### Generating ditaus with Whizard

As explained in the dedicated [Whizard section](#whizard), to use `whizard` we need a `Sindarin` configuration file. To generate ditau events we will use the file
[Z_tautau.sin](http://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/Z_tautau.sin):
[Z_tautau.sin](https://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/Z_tautau.sin):
```
$ wget http://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/Z_tautau.sin
$ wget https://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/Z_tautau.sin
```
and run it in a dedicate directory to not pollute the working one with the many files produced:
```
Expand All @@ -783,7 +783,7 @@ The first lines of the `LHEf` file give the total cross-section: 1.508 +- 2 pb,
In order to get the events in `EDM4hep` format, we exploit the fact that `Pythia` provides `LHEf` reader functionality. To activate that we will use `Gaudi` and special `.cmd` file the consider the input `LHEf` input file as a `Beam`. This special `.cmd` is called `p8_lhereader.cmd` and it is available on the web:
```
S cd ../cards
wget http://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/p8_lhereader.cmd
wget https://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/p8_lhereader.cmd
```
Please note the lines
```
Expand Down Expand Up @@ -952,7 +952,7 @@ i.e the total ditau cross-section at 91.2 GeV from `KKMCee` is 1485.5 +- 0.007 p
In order to get the events in `EDM4hep` format, we will use `Gaudi` and the tools available in [k4FWCore](https://github.com/key4hep/k4FWCore) and [k4Gen](https://github.com/HEP-FCC/k4Gen/). We need a Gaudi steering file that reads the `HepMC` file and writes out the `EDM4hep` file.
A minimal version of such a steering code is available on the tutorial reference page:
```
wget http://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/hepmc2edm.py
wget https://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/hepmc2edm.py
```
Let's see what it does: that is shown by the first line of the help function
```
Expand Down Expand Up @@ -1096,7 +1096,7 @@ Now we are ready to go.

#### Creating histograms with FCCAnalyses
At this purpose we will use the recently introduced `build_graph` attribute. The example is availble at
[histmaker_ttmm.py](http://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/histmaker_ttmm.py).
[histmaker_ttmm.py](https://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/histmaker_ttmm.py).

##### Dissection of `histmaker_ttmm.py`

Expand Down Expand Up @@ -1193,7 +1193,7 @@ total 24
#### Comparing distributions

FCCAnalyses provides the `plots` option to prepare some plots. A possible way to plot the histos is available at
[plots_ttmm.py](http://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/plots_ttmm.py), which can run as
[plots_ttmm.py](https://fccsw.web.cern.ch/tutorials/apr2023/tutorial1/plots_ttmm.py), which can run as
```
$ fccanalysis plots plots_ttmm.py
```
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Expand Up @@ -36,7 +36,7 @@ Let's first run the CLD Geant4 simulation, through ddsim, for some $e^{+}e^{-} \
git clone https://github.com/key4hep/CLDConfig.git
cd CLDConfig/CLDConfig
# retrieve Z(mumu)H(X) MC generator events
wget http://fccsw.web.cern.ch/fccsw/tutorials/MIT2024/wzp6_ee_mumuH_ecm240_GEN.stdhep.gz
wget https://fccsw.web.cern.ch/fccsw/tutorials/MIT2024/wzp6_ee_mumuH_ecm240_GEN.stdhep.gz
gunzip wzp6_ee_mumuH_ecm240_GEN.stdhep.gz
# run the Geant4 simulation
ddsim -I wzp6_ee_mumuH_ecm240_GEN.stdhep -N 10 -O wzp6_ee_mumuH_ecm240_CLD_SIM.root --compactFile $K4GEO/FCCee/CLD/compact/CLD_o2_v05/CLD_o2_v05.xml --steeringFile cld_steer.py
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2 changes: 1 addition & 1 deletion software-basics/prerequisites.md
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Expand Up @@ -61,7 +61,7 @@ is still available.
## Special notes or alternative cases / settings
### Bash shell

The [Bash shell](http://cern.ch/go/gdJ9) will be used
The [Bash shell](https://cern.ch/go/gdJ9) will be used
throughout the workshop.
The default for new computing accounts is now Bash. If you have an older
account, the default used to be a shell called `tcsh`
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2 changes: 1 addition & 1 deletion software-basics/swan.md
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Expand Up @@ -9,7 +9,7 @@

SWAN is a web service for running jupyter notebooks at CERN, and is a very convenient way of running tutorials if one has a CERN computing account.

SWAN can be used only with a browser and is reached by visiting <http://swan.cern.ch> .
SWAN can be used only with a browser and is reached by visiting <https://swan.cern.ch>.

After logging in, SWAN will ask you to configure your session. The default software stack (`102` at the moment can be kept, but to use the Key4hep, software the following environment script has to be used:
```
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