Release 2.0.1

bcgsc · Sep 14, 2016 · 7c2c036 · 7c2c036
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commit 7c2c036
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diff --git a/ChangeLog b/ChangeLog
@@ -1,3 +1,8 @@
+2016-09-14  Ben Vandervalk <benv@bcgsc.ca>
+
+	* Release version 2.0.1
+	* Resolve licensing issues by switching to standard GPL-3 license
+
 2016-08-30  Ben Vandervalk <benv@bcgsc.ca>
 
 	* Release version 2.0.0

diff --git a/bin/abyss-pe b/bin/abyss-pe
@@ -348,7 +348,7 @@ help:
 	@echo 'Report bugs to https://github.com/bcgsc/abyss/issues or abyss-users@bcgsc.ca.'
 
 version:
-	@echo "abyss-pe (ABySS) 2.0.0"
+	@echo "abyss-pe (ABySS) 2.0.1"
 	@echo "Written by Shaun Jackman and Anthony Raymond."
 	@echo
 	@echo "Copyright 2012 Canada's Michael Smith Genome Science Centre"

diff --git a/configure.ac b/configure.ac
@@ -1,5 +1,5 @@
 AC_PREREQ(2.62)
-AC_INIT(ABySS, 2.0.0, abyss-users@bcgsc.ca, abyss,
+AC_INIT(ABySS, 2.0.1, abyss-users@bcgsc.ca, abyss,
 		http://www.bcgsc.ca/platform/bioinfo/software/abyss)
 m4_include(m4/m4_ax_pthread.m4)
 AM_INIT_AUTOMAKE(1.9.6 foreign subdir-objects)
@@ -252,7 +252,7 @@ elif test x"$enable_werror" = x"yes"; then
 	AC_SUBST(AM_CXXFLAGS, '-Wall -Wextra -Werror')
 else
 	# default
-	AC_SUBST(AM_CXXFLAGS, '-Wall -Wextra -Werror')
+	AC_SUBST(AM_CXXFLAGS, '-Wall -Wextra')
 fi
 
 # Build abyss-paired-dbg and abyss-paired-dbg-mpi

diff --git a/doc/ABYSS.1 b/doc/ABYSS.1
@@ -1,4 +1,4 @@
-.TH ABYSS "1" "2015-May" "ABYSS (ABySS) 2.0.0" "User Commands"
+.TH ABYSS "1" "2015-May" "ABYSS (ABySS) 2.0.1" "User Commands"
 .SH NAME
 ABYSS \- assemble short reads into contigs
 .SH SYNOPSIS

diff --git a/doc/abyss-pe.1 b/doc/abyss-pe.1
@@ -1,4 +1,4 @@
-.TH abyss-pe "1" "2015-May" "abyss-pe (ABySS) 2.0.0" "User Commands"
+.TH abyss-pe "1" "2015-May" "abyss-pe (ABySS) 2.0.1" "User Commands"
 .SH NAME
 abyss-pe - assemble reads into contigs
 .SH SYNOPSIS

diff --git a/doc/abyss-tofastq.1 b/doc/abyss-tofastq.1
@@ -1,4 +1,4 @@
-.TH abyss-tofastq "1" "2015-May" "ABySS 2.0.0" "User Commands"
+.TH abyss-tofastq "1" "2015-May" "ABySS 2.0.1" "User Commands"
 .SH NAME
 abyss-tofastq \- convert various file formats to FASTQ format
 .br

diff --git a/doc/flowchart.graffle b/doc/flowchart.graffle
@@ -5198,7 +5198,7 @@
 {\colortbl;\red255\green255\blue255;}
 \pard\tx560\tx1120\tx1680\tx2240\tx2800\tx3360\tx3920\tx4480\tx5040\tx5600\tx6160\tx6720\pardirnatural\qc
 
-\f0\b\fs28 \cf0 ABySS paired-end pipeline version 2.0.0}</string>
+\f0\b\fs28 \cf0 ABySS paired-end pipeline version 2.0.1}</string>
 				<key>VerticalPad</key>
 				<integer>0</integer>
 			</dict>