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180 slicing options #194

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merged 2 commits into from
Apr 23, 2024
Merged

180 slicing options #194

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de0c403
#180 hardcode color
matthew-oberg Apr 22, 2024
2882bf2
#180 slice color done
matthew-oberg Apr 23, 2024
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3 changes: 2 additions & 1 deletion GoVizzy/gv_ui/gv_ui/DisplayUI.py
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Original file line number Diff line number Diff line change
Expand Up @@ -121,7 +121,8 @@ def display_app():
gvWidgets.slice_y_check,
gvWidgets.slice_z_slider,
gvWidgets.slice_z_check,
figure_controls])
gvWidgets.slice_color,
figure_controls,])
display(slice_box)


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15 changes: 11 additions & 4 deletions GoVizzy/gv_ui/gv_ui/gvWidgets.py
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Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
Documentation for widget library: https://ipywidgets.readthedocs.io/en/latest/examples/Widget%20List.html#file-upload
'''
from IPython.display import display
from ipywidgets import Layout, Button, Box, Textarea, Label, ColorPicker, FloatSlider, Checkbox, link, BoundedFloatText, IntSlider
from ipywidgets import Layout, Button, Box, Textarea, Label, ColorPicker, FloatSlider, Checkbox, link, BoundedFloatText, IntSlider, Dropdown
from ipyvolume.widgets import Mesh, Scatter
import numpy as np

Expand Down Expand Up @@ -67,6 +67,13 @@
indent=True
)

slice_color = Dropdown(
options=['Grays', 'Reds', 'Oranges', 'Greens', 'Blues', 'Purples'],
description='Slice Color Scheme',
disabled=False,
indent=True
)

bond_visibility_toggle = Checkbox(
value=True,
description='Bond Visibility',
Expand All @@ -75,7 +82,7 @@
)

bond_color_picker = ColorPicker(
value="black",
value="black",
description="Bond Color"
)

Expand Down Expand Up @@ -146,7 +153,7 @@ def atom_scale_slider(atom: Mesh, description: str="Scale"):
# Input form items
form_items = [

Box([Label(value='Path to .cube file'),
Box([Label(value='Path to .cube file'),
Textarea()], layout=form_item_layout),
color,
Button(description='Submit', layout=Layout(flex='1 1 0%', width='auto')),
Expand All @@ -162,4 +169,4 @@ def atom_scale_slider(atom: Mesh, description: str="Scale"):
width='50%'
))

form, color, slice_x_slider, slice_y_slider, slice_z_slider, slice_x_check, slice_y_check, slice_z_check, bond_scale_slider, bond_color_picker, bond_visibility_toggle
form, color, slice_x_slider, slice_y_slider, slice_z_slider, slice_x_check, slice_y_check, slice_z_check, slice_color, bond_scale_slider, bond_color_picker, bond_visibility_toggle
7 changes: 4 additions & 3 deletions GoVizzy/gv_ui/gv_ui/plotting.py
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Original file line number Diff line number Diff line change
Expand Up @@ -150,9 +150,10 @@ def display_cell_slices(self):

# Slice order is different to match ipyvolume, which plots the volume in a y-up orientation
def update(x = 0, y = 0, z = 0):
xSlice.imshow(cube.data3D[:, :, x])
ySlice.imshow(cube.data3D[:, y, :])
zSlice.imshow(cube.data3D[z, :, :])
color = str(gvWidgets.slice_color.value)
xSlice.imshow(cube.data3D[:, :, x], cmap=color,)
ySlice.imshow(cube.data3D[:, y, :], cmap=color,)
zSlice.imshow(cube.data3D[z, :, :], cmap=color,)
plt.show()

out = widgets.interactive_output(update, {'x':gvWidgets.slice_x_slider,
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