Setup continuous integration testing #16
Workflow file for this run
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| name: Test suite | |
| on: | |
| # Trigger the CI whenever a commit is pushed to main or develop, i.e., a PR is merged | |
| push: | |
| branches: [main, develop] | |
| # Trigger the CI whenever a commit is pushed to an open PR | |
| pull_request: | |
| branches: [main, develop] | |
| jobs: | |
| # Test that GISS-GC can be compiled without error | |
| compile: | |
| runs-on: ubuntu-22.04 | |
| container: | |
| image: ghcr.io/fetch4/giss-gc-dev-env:latest | |
| credentials: | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.github_token }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Build GISS-GC with GISS_GC_14 rundeck | |
| run: | | |
| . /opt/spack-environment/activate.sh | |
| # Environment variables for compiler | |
| export CC=gcc | |
| export CXX=g++ | |
| export FC=gfortran | |
| export F90=gfortran | |
| export F77=gfortran | |
| # Environment variables for GISS-GC | |
| export GISS_HOME=$(pwd) | |
| export RUNID=GISS_GC_14 | |
| export ModelE_Support=/run | |
| mkdir -p ${ModelE_Support} | |
| # export ROOT=/data/ExtData/HEMCO # TODO: Do we need to download the inputs? | |
| # Environment variables for passing NetCDF-C paths to GEOS-Chem | |
| export NETCDF_HOME=$(nc-config --prefix) | |
| export GC_BIN=${NETCDF_HOME}/bin | |
| export GC_INCLUDE=${NETCDF_HOME}/include | |
| export GC_LIB=${NETCDF_HOME}/lib | |
| # Environment variables for passing NetCDF-Fortran paths to GEOS-Chem | |
| export NETCDF_F_HOME=$(nf-config --prefix) | |
| export GC_F_BIN=${NETCDF_F_HOME}/bin | |
| export GC_F_INCLUDE=${NETCDF_F_HOME}/include | |
| export GC_F_LIB=${NETCDF_F_HOME}/lib | |
| # Environment variable for OpenMPI build | |
| export MPI_ROOT=/opt/software/linux-ubuntu22.04-skylake/gcc-11.4.0/openmpi-4.1.6-s3fu5gvaasgjy4jecnb6rvemx7oofexx/ | |
| # Misc settings | |
| export F_UFMTENDIAN=big | |
| export KMP_STACKSIZE=100000000 | |
| export OMP_NUM_THREADS=36 | |
| # Copy over rundeck and modelErc | |
| cp .github/rundecks/GISS_GC_14.R ${GISS_HOME}/decks | |
| cp .github/modelErc ~/.modelErc | |
| # Make run directories | |
| mkdir -p ~/run/exec | |
| mkdir -p ~/run/huge_space | |
| mkdir -p ~/run/prod_decks | |
| mkdir -p ~/run/prod_input_files | |
| mkdir -p ~/run/prod_runs | |
| # Build the model | |
| cd ${GISS_HOME}/decks | |
| apt install cpp m4 -y | |
| make -j setup RUN=${RUNID} F90=mpif90 GC=YES |