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Revert to coverage run instead of python3 -m coverage due to path issue;
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@jorgensd
jorgensd committed Oct 28, 2023
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100 changes: 50 additions & 50 deletions .github/workflows/test_mpc.yml
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Expand Up @@ -55,7 +55,7 @@ jobs:
HDF5_DIR: "/usr/local/"
MPC_BUILD_MODE: ${{ matrix.build_mode }}
MPC_CMAKE_CXX_FLAGS: "-Wall -Werror -g -pedantic -Ofast -march=native"
PYTHONPATH: "/usr/local/dolfinx-${PETSC_TYPE}/lib/python3.10/dist-packages:/usr/local/lib:${GITHUB_WORKSPACE}/dolfinx_mpc/python/demos"
PYTHONPATH: "/usr/local/dolfinx-${PETSC_TYPE}/lib/python3.10/dist-packages"
LD_LIBRARY_PATH: "/usr/local/petsc/${PETSC_ARCH}/lib/:/usr/local"
DEB_PYTHON_INSTALL_LAYOUT: deb_system
steps:
Expand Down Expand Up @@ -103,82 +103,82 @@ jobs:


- name: Run tests (serial)
run: python3 -m coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/ -vs
run: coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/ -vs

- name: Run tests (2 processes)
run: mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/ -vs
run: mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/ -vs

- name: Run tests (3 processes)
run: mpirun -n 3 python3 -m coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/
run: mpirun -n 3 coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/

- name: Run tests (4 processes)
run: mpirun -n 4 python3 -m coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/
run: mpirun -n 4 coverage run --rcfile=.coveragerc -m mpi4py -m pytest python/tests/

- name: Run benchmarks
run: |
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_periodic.py --nref=2 --tet --gamg --timings
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_elasticity_edge.py --nref=2 --gamg --timings
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_contact_3D.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_periodic.py --nref=2 --tet --gamg --timings
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_elasticity_edge.py --nref=2 --gamg --timings
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/benchmarks/bench_contact_3D.py
- name: Run demos (serial)
run: |
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_elasticity.py
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_periodic_geometrical.py
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_stokes.py
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_periodic3d_topological.py
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_elasticity_disconnect_2D.py
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_elasticity_disconnect.py
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_periodic_gep.py
coverage run --rcfile=.coveragerc python/demos/demo_elasticity.py
coverage run --rcfile=.coveragerc python/demos/demo_periodic_geometrical.py
coverage run --rcfile=.coveragerc python/demos/demo_stokes.py
coverage run --rcfile=.coveragerc python/demos/demo_periodic3d_topological.py
coverage run --rcfile=.coveragerc python/demos/demo_elasticity_disconnect_2D.py
coverage run --rcfile=.coveragerc python/demos/demo_elasticity_disconnect.py
coverage run --rcfile=.coveragerc python/demos/demo_periodic_gep.py
- name: Run demos (parallel)
run: |
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity.py
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic_geometrical.py
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_stokes.py
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic3d_topological.py
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity_disconnect_2D.py
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity_disconnect.py
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic_gep.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic_geometrical.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_stokes.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic3d_topological.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity_disconnect_2D.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_elasticity_disconnect.py
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_periodic_gep.py
- name: Run contact demos 2D (serial)
run: |
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --theta 0 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --theta 1.05 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --gmsh --theta 0 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --gmsh --theta 1.05 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --quad --gmsh --theta 0 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --quad --gmsh --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --gmsh --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --gmsh --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --quad --gmsh --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_2D.py --quad --gmsh --theta 1.05 --timing
- name: Run contact demos 2D (parallel)
run: |
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --theta 0 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --theta 1.05 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --gmsh --theta 0 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --gmsh --theta 1.05 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --quad --gmsh --theta 0 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --quad --gmsh --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --gmsh --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --gmsh --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --quad --gmsh --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_2D.py --quad --gmsh --theta 1.05 --timing
- name: Run contact demos 3D (serial)
run: |
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --theta 0 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --theta 1.05 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --theta 0 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --theta 1.05 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --theta 0 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --theta 1.05 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 0 --timing
python3 -m coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --theta 1.05 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 0 --timing
coverage run --rcfile=.coveragerc python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 1.05 --timing
- name: Run contact demos 3D (parallel)
run: |
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --theta 0 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --theta 1.05 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --theta 0 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --theta 1.05 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --theta 0 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --theta 1.05 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 0 --timing
mpirun -n 2 python3 -m coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --theta 1.05 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 0 --timing
mpirun -n 2 coverage run --rcfile=.coveragerc -m mpi4py python/demos/demo_contact_3D.py --gmsh --no-slip --hex --theta 1.05 --timing
- name: Combine coverage reports
run: |
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