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Add ML options to flame problem#370

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doreenfan wants to merge 44 commits intodevelopmentAMReX-Astro/MAESTROeX:developmentfrom add_pytorch_model_igsimpleAMReX-Astro/MAESTROeX:add_pytorch_model_igsimpleCopy head branch name to clipboard

+1,792-3

Commits

Commits on May 19, 2021

• add option for Strang to save input & output reactions data in plotfiles intermittently

  dwillcox

  committed
  4604a84

Commits on Jun 21, 2021

• Merge remote-tracking branch 'upstream_don/save_reactions' into ML_save

  

  Chris DeGrendele

  committed
  79bb3dd

• Store timestep information in time in plot file. Change output to start at 2 to give simulation time to reach equilibrium

  

  Chris DeGrendele

  committed
  eba157d

Commits on Sep 17, 2021

• Merge branch 'development' into ML_save

  ajnonaka

  committed
  218dbc0

• switch to aprox13 and comment out the actual_rhs_module

  ajnonaka

  committed
  d0e277c

• use fixed dt

  ajnonaka

  committed
  a8ed220

Commits on Sep 21, 2021

• 500 time steps with fixed_dt=2.4e-8

  ajnonaka

  committed
  1c3e449

• Merge branch 'ML_save_ajn' of https://github.com/AMReX-Astro/MAESTROeX into ML_save_ajn

  ajnonaka

  committed
  7e6e0e6

• add option for Strang to save input & output reactions data in plotfiles intermittently

  

  dwillcox

  authored and

  doreenfan

  committed
  0b04ebb

• Store timestep information in time in plot file. Change output to start at 2 to give simulation time to reach equilibrium

  

  Chris DeGrendele

  authored and

  doreenfan

  committed
  d8b2692

• save rhs into output plotfile for ML

  

  dwillcox

  authored and

  doreenfan

  committed
  176b27c

• If we are using CXX_REACTIONS or CXX_EOS, then do not compile the Fortran hooks, as Microphysics may not contain the F90 versions of that net or eos.

  

  dwillcox

  authored and

  doreenfan

  committed
  0823049

Commits on Oct 5, 2021

• Merge branch 'development' into ML_save_ajn

  doreenfan

  committed
  bed351e

Commits on Oct 6, 2021

• Merge branch 'development' into ML_save_ajn

  ajnonaka

  committed
  44bca35

Commits on Oct 12, 2021

• Merge branch 'ML_save_ajn' of https://github.com/AMReX-Astro/MAESTROeX into ML_save_ajn

  doreenfan

  committed
  88b13b5

Commits on Nov 2, 2021

• Merge branch 'development' into ML_save_ajn

  doreenfan

  committed
  70fec26

Commits on Nov 4, 2021

• Add perturbations to mass fractions to generate varied input/output for ML

  doreenfan

  committed
  15a72b6

• Add density and temperature perturbations

  doreenfan

  committed
  693d60c

• Change minimum istep to 1

  doreenfan

  committed
  721e595

• tabs/whitespace

  ajnonaka

  committed
  f57cdb0

• Perturb all trace species mass fractions instead of just one

  doreenfan

  committed
  459348b

• Merge branch 'ML_save_perturb' of https://github.com/AMReX-Astro/MAESTROeX into ML_save_perturb

  doreenfan

  committed
  df1bec0

• Change log base to 10

  doreenfan

  committed
  5bfd619

Commits on Jan 6, 2022

• Merge branch 'development' into ML_save_perturb

  Show description for 13a578b
  doreenfan

  committed
  13a578b

Commits on Jan 14, 2022

• Change perturbation of density and temperature to much smaller values

  doreenfan

  committed
  1f27a32

Commits on Jan 18, 2022

• Remove perturbation limit of 10^-4

  doreenfan

  committed
  fb1f0e4

Commits on Jan 19, 2022

• Revert "Change perturbation of density and temperature to much smaller values"

  Show description for 692320f
  doreenfan

  committed
  692320f

Commits on Jan 20, 2022

• Add perturbations for ignition_simple network

  doreenfan

  committed
  c3eec05

Commits on Jan 28, 2022

• Merge branch 'development' into ML_save_perturb

  doreenfan

  committed
  2f7d302

Commits on Feb 1, 2022

• Add ML option to evaluate ignition_simple network

  doreenfan

  committed
  abc553e

Commits on Feb 25, 2022

• Change perturbation to 10% of smaller mass fraction

  doreenfan

  committed
  57019e1

• Change ML model to use only 2 species (C12, Mg24)

  doreenfan

  committed
  ec6ad18

Commits on Mar 2, 2022

• Merge branch 'development' into add_pytorch_model_igsimple

  doreenfan

  committed
  5d4455a

Commits on Mar 3, 2022

• Generalize random perturbation when generating training data

  doreenfan

  committed
  cb83a74

• Use ML model and write react data plotfiles starting at step 1

  doreenfan

  committed
  fa70af9

• Add ML capabilities to reacting_bubble problem

  doreenfan

  committed
  0f1b284

Commits on May 5, 2022

• Merge branch 'development' into add_pytorch_model_igsimple

  doreenfan

  committed
  fad7ca4

Commits on Jun 29, 2022

• Fix CUDA compilation

  WeiqunZhang

  committed
  28716cc

Commits on Mar 20, 2023

• Merge branch 'development' into add_pytorch_model_igsimple

  Show description for dac5009
  doreenfan

  committed
  dac5009

• Add README containing instructions on how to run an ML problem.

  doreenfan

  committed
  b31f848

• Revert some non-ML problems back

  doreenfan

  committed
  345f943

• Update README to include flame_ml problem description

  doreenfan

  committed
  8f009e9

• Update defines to include ML options in CI workflow

  doreenfan

  committed
  81618fa

Commits on Apr 13, 2023

• Merge branch 'development' into add_pytorch_model_igsimple

  zingale

  authored
  8b1ee81