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Update macbook conda #72

Merged
merged 20 commits into from
May 6, 2024
Merged

Update macbook conda #72

merged 20 commits into from
May 6, 2024

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MMathisLab
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@MMathisLab MMathisLab commented May 3, 2024

  • adding napari_cellseg3D to the conda
  • removing un-used packages
  • note that it works for m2, m3 chips too

@MMathisLab MMathisLab requested a review from C-Achard May 3, 2024 10:59
@C-Achard C-Achard mentioned this pull request May 3, 2024
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MMathisLab commented May 3, 2024

@C-Achard in the docs after install, if would be really great to either say (1) how to launch the app, or (2) link to the page that does so! For example, I have an env built, and if I want to just run "inference," if i jump to that tab it doesn't tell me how to launch the app ;) so I would link to: https://adaptivemotorcontrollab.github.io/CellSeg3d/welcome.html#usage

conda/napari_cellseg3d_ARM64.yml Outdated Show resolved Hide resolved
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C-Achard commented May 3, 2024

@C-Achard in the docs after install, if would be really great to either say (1) how to launch the app, or (2) link to the page that does so! For example, I have an env built, and if I want to just run "inference," if i jump to that tab it doesn't tell me how to launch the app ;) so I would link to: https://adaptivemotorcontrollab.github.io/CellSeg3d/welcome.html#usage

Will do, thanks ! :D

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MMathisLab commented May 3, 2024

in docs @C-Achard you might consider adding a note on how to update an env, deactivate first, be in the root project folder, and run conda env update --f conda/napari_cellseg3d_m1.yml

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C-Achard commented May 3, 2024

in docs @C-Achard you might consider adding a note on how to update an env, deactivate first, be in the root project folder, and run conda env update --f conda/napari_cellseg3d_m1.yml

Done !

@MMathisLab MMathisLab requested a review from C-Achard May 3, 2024 11:39
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tested on my M2 chip; all works (aside from I modified to keep "old name" napari-cellseg3d, but once 0.2.0 is merged this will work.

@C-Achard C-Achard merged commit ba0ee67 into main May 6, 2024
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@MMathisLab MMathisLab deleted the MMathisLab-conda branch May 6, 2024 12:08
@C-Achard C-Achard added this to the v0.2.0 milestone May 10, 2024
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