fixing obsolete terms and release

AgriculturalSemantics · Nov 2, 2022 · 996cdf5 · 996cdf5
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commit 996cdf5
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Showing 4 changed files with 71 additions and 8 deletions.
diff --git a/agro.owl b/agro.owl
@@ -14062,7 +14062,7 @@ chain and sprockets from the ground wheel.</owl:annotatedTarget>
         <obo1:IAO_0000115 xml:lang="en">The amount of a pesticide</obo1:IAO_0000115>
         <dc:creator rdf:resource="http://orcid.org/0000-0001-6284-4821"/>
         <rdfs:label xml:lang="en">obsolete pesticide amount</rdfs:label>
-        <owl:deprecated xml:lang="en">true</owl:deprecated>
+        <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </owl:Class>
 
 
@@ -14109,7 +14109,7 @@ chain and sprockets from the ground wheel.</owl:annotatedTarget>
         <obo1:IAO_0000115 xml:lang="en">The amount of a weeding chemical</obo1:IAO_0000115>
         <dc:creator rdf:resource="http://orcid.org/0000-0001-6284-4821"/>
         <rdfs:label xml:lang="en">obsolete weeding chemical amount</rdfs:label>
-        <owl:deprecated xml:lang="en">true</owl:deprecated>
+        <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </owl:Class>
 
 

diff --git a/imports/envo_terms.txt b/imports/envo_terms.txt
@@ -141,9 +141,72 @@ http://purl.obolibrary.org/obo/ENVO_09200016 ## conductivity of soil
 http://purl.obolibrary.org/obo/ENVO_09000027 ## soil salt concentration
 http://purl.obolibrary.org/obo/ENVO_03600018 ## organic horizon
 http://purl.obolibrary.org/obo/ENVO_03000129 ## mooson season
+http://purl.obolibrary.org/obo/ENVO_06105300 ## wastewater treatment process
+http://purl.obolibrary.org/obo/ENVO_06105301 ## desalination process
+http://purl.obolibrary.org/obo/ENVO_01000896 ## freezing rainfall
+http://purl.obolibrary.org/obo/ENVO_01001363 ## volume of hydrological precipitation
+http://purl.obolibrary.org/obo/ENVO_09200022 ## sunshine hours
+http://purl.obolibrary.org/obo/ENVO_01001361 ## amospheric wind direction
+http://purl.obolibrary.org/obo/ENVO_09200010 ## acidity of soil
+http://purl.obolibrary.org/obo/ENVO_00010005 ## soil bulk density
+http://purl.obolibrary.org/obo/ENVO_06105201 ## water table
+http://purl.obolibrary.org/obo/ENVO_06105202 ## soil compaction
+http://purl.obolibrary.org/obo/ENVO_06105203 ## water table depth
+http://purl.obolibrary.org/obo/ENVO_06105204 ## photosynthetic photon flux density
+http://purl.obolibrary.org/obo/ENVO_06105205 ## compacted soil
+http://purl.obolibrary.org/obo/ENVO_06105210 ## soil percolation rate
+http://purl.obolibrary.org/obo/ENVO_06105211 ## runoff
+http://purl.obolibrary.org/obo/ENVO_06105213 ## photosynthetic photon flux
+http://purl.obolibrary.org/obo/ENVO_06105215 ## rainy day count
+http://purl.obolibrary.org/obo/ENVO_06105225 ## soil layer top depth
+http://purl.obolibrary.org/obo/ENVO_06105226 ## soil layer bottom depth
+http://purl.obolibrary.org/obo/ENVO_06105230 ## water infiltration
+http://purl.obolibrary.org/obo/ENVO_06105231 ## water infiltration into soil
+http://purl.obolibrary.org/obo/ENVO_06105232 ## soil albedo
+http://purl.obolibrary.org/obo/ENVO_06105233 ## dry soil albedo
+http://purl.obolibrary.org/obo/ENVO_06105234 ## moist soil albedo
+http://purl.obolibrary.org/obo/ENVO_06105236 ## exchangeable ion
+http://purl.obolibrary.org/obo/ENVO_06105237 ## exchangeable potassium
+http://purl.obolibrary.org/obo/ENVO_06105238 ## residual water in soil
+http://purl.obolibrary.org/obo/ENVO_06105239 ## exchangeable calcium
+http://purl.obolibrary.org/obo/ENVO_06105240 ## cation exchange capacity
+http://purl.obolibrary.org/obo/ENVO_06105241 ## soil drainage
+http://purl.obolibrary.org/obo/ENVO_06105242 ## basic cation exchange capacity
+http://purl.obolibrary.org/obo/ENVO_06105265 ## net shortwave radiation
+http://purl.obolibrary.org/obo/ENVO_06105266 ## soil layer
+http://purl.obolibrary.org/obo/ENVO_06105267 ## soil profile characterization
 http://purl.obolibrary.org/obo/ENVO_06105268 ## treated wastewater
 http://purl.obolibrary.org/obo/ENVO_06105269 ## desalinated water
+http://purl.obolibrary.org/obo/ENVO_06105271 ## soil texture
+http://purl.obolibrary.org/obo/ENVO_06105272 ## loamy sand
+http://purl.obolibrary.org/obo/ENVO_06105273 ## fine sand
+http://purl.obolibrary.org/obo/ENVO_06105274 ## sandy loam
+http://purl.obolibrary.org/obo/ENVO_06105275 ## silty loam
+http://purl.obolibrary.org/obo/ENVO_06105276 ## sandy clay loam
+http://purl.obolibrary.org/obo/ENVO_06105277 ## clay loam
+http://purl.obolibrary.org/obo/ENVO_06105278 ## silty clay loam
+http://purl.obolibrary.org/obo/ENVO_06105279 ## sandy clay
+http://purl.obolibrary.org/obo/ENVO_06105280 ## silty clay
 http://purl.obolibrary.org/obo/ENVO_06105300 ## wastewater treatment process
 http://purl.obolibrary.org/obo/ENVO_06105301 ## desalination process
-http://purl.obolibrary.org/obo/ENVO_01000896 ## freezing rainfall
-http://purl.obolibrary.org/obo/ENVO_01001363 ## volume of hydrological precipitation
+http://purl.obolibrary.org/obo/ENVO_06105302 ## field capacity
+http://purl.obolibrary.org/obo/ENVO_06105303 ## permanent wilting point
+http://purl.obolibrary.org/obo/ENVO_06105304 ## water-holding capacity of soil
+http://purl.obolibrary.org/obo/ENVO_09000028 ## evaporation of liquid water in soil
+http://purl.obolibrary.org/obo/ENVO_09000026 ## concentration of liquid water in soil
+http://purl.obolibrary.org/obo/ENVO_09000029 ## rate of hydrological evaporation in soil
+http://purl.obolibrary.org/obo/ENVO_09200020 ## concentration of nitrate in groundwater
+http://purl.obolibrary.org/obo/ENVO_1000745 ## drought
+http://purl.obolibrary.org/obo/ENVO_2000003 ## agricultural wastewater treatment plant
+http://purl.obolibrary.org/obo/ENVO_2000007 ## biochar
+http://purl.obolibrary.org/obo/ENVO_01001865 ## concentration of carbon dioxide in an atmosphere
+http://purl.obolibrary.org/obo/ENVO_01001862 ## Solar radiation
+http://purl.obolibrary.org/obo/ENVO_01000706 ## soil erosion
+http://purl.obolibrary.org/obo/ENVO_04000008 ## soil organic matter
+http://purl.obolibrary.org/obo/ENVO_03000123 ## concentration of nitrate and nitrite in liquid water
+http://purl.obolibrary.org/obo/ENVO_04000003 ## concentration of carbon dioxide in soil
+http://purl.obolibrary.org/obo/ENVO_04000004 ## concentration of carbon dioxide in air
+http://purl.obolibrary.org/obo/ENVO_09000026 ## concentration of liquid water in soil
+http://purl.obolibrary.org/obo/ENVO_09000028 ## evaporation of liquid water in soil
+http://purl.obolibrary.org/obo/ENVO_09000029 ## rate of hydrological evaporation in soil
+http://purl.obolibrary.org/obo/ENVO_09200020 ## concentration of nitrate in groundwater
diff --git a/src/ontology/agro-edit.owl b/src/ontology/agro-edit.owl
@@ -4626,7 +4626,7 @@ SubClassOf(<http://purl.obolibrary.org/obo/AGRO_00000559> <http://purl.obolibrar
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/AGRO_00000560> "The amount of a pesticide"@en)
 AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/AGRO_00000560> <http://orcid.org/0000-0001-6284-4821>)
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/AGRO_00000560> "obsolete pesticide amount"@en)
-AnnotationAssertion(owl:deprecated <http://purl.obolibrary.org/obo/AGRO_00000560> "true"@en)
+AnnotationAssertion(owl:deprecated <http://purl.obolibrary.org/obo/AGRO_00000560> "true"^^xsd:boolean)
 
 # Class: <http://purl.obolibrary.org/obo/AGRO_00000561> (number of pesticide application)
 
@@ -4649,7 +4649,7 @@ SubClassOf(<http://purl.obolibrary.org/obo/AGRO_00000562> <http://purl.obolibrar
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/AGRO_00000563> "The amount of a weeding chemical"@en)
 AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/AGRO_00000563> <http://orcid.org/0000-0001-6284-4821>)
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/AGRO_00000563> "obsolete weeding chemical amount"@en)
-AnnotationAssertion(owl:deprecated <http://purl.obolibrary.org/obo/AGRO_00000563> "true"@en)
+AnnotationAssertion(owl:deprecated <http://purl.obolibrary.org/obo/AGRO_00000563> "true"^^xsd:boolean)
 
 # Class: <http://purl.obolibrary.org/obo/AGRO_00000564> (distance between the water source and the field)
 

diff --git a/src/ontology/agro.owl b/src/ontology/agro.owl
@@ -14062,7 +14062,7 @@ chain and sprockets from the ground wheel.</owl:annotatedTarget>
         <obo1:IAO_0000115 xml:lang="en">The amount of a pesticide</obo1:IAO_0000115>
         <dc:creator rdf:resource="http://orcid.org/0000-0001-6284-4821"/>
         <rdfs:label xml:lang="en">obsolete pesticide amount</rdfs:label>
-        <owl:deprecated xml:lang="en">true</owl:deprecated>
+        <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </owl:Class>
 
 
@@ -14109,7 +14109,7 @@ chain and sprockets from the ground wheel.</owl:annotatedTarget>
         <obo1:IAO_0000115 xml:lang="en">The amount of a weeding chemical</obo1:IAO_0000115>
         <dc:creator rdf:resource="http://orcid.org/0000-0001-6284-4821"/>
         <rdfs:label xml:lang="en">obsolete weeding chemical amount</rdfs:label>
-        <owl:deprecated xml:lang="en">true</owl:deprecated>
+        <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </owl:Class>