Bioinformatics - Sequence Alignment

Dot Matrix, Needleman-Wunch & Smith-Waterman Algorithms

This repository contains implementations to different algorithms used in the Bioinformatics field. The following algorithms are suitable for Global & Local DNA sequence allignment.

You may find jupyter notebooks containing an implementation and visualization of the following algorithms:

1- Dot Matrix using Window Scoring

2- Needleman-Wunch Algorithm

3- Smith-Waterman Algorithm