sars-cov-2-russia

nextstrain/auspice build for SARS-CoV-2 sequences, collected in Russia

This reposiory holds supplementary materials for the article "Isolation and phylogenetic analysis of SARS-CoV-2 variants collected in Russia during the COVID-19 outbreak" available at https://www.sciencedirect.com/science/article/pii/S120197122030566X

1. Install Nextstrain as described here: https://nextstrain.org/docs/getting-started/quickstart
2. Download sars-cov-2-russia repository
3. Run

nextstrain view ./sars-cov-2-russia/auspice/

4. Open http://127.0.0.1:4000 in your browser to see the result