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WIP: WGCNA module draft#350

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cansavvy wants to merge 11 commits intostagingAlexsLemonade/refinebio-examples:stagingfrom cansavvy/wgcnaAlexsLemonade/refinebio-examples:cansavvy/wgcnaCopy head branch name to clipboard

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Commits

Commits on Nov 10, 2020

• Push a basic draft that doesn't exactly work

  cansavvy

  committed
  aa88556

Commits on Nov 11, 2020

• More words and polishing

  cansavvy

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  c029600

• Try out some plots

  cansavvy

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  9ac8121

• Put some DRAFT and REVIEW designations

  cansavvy

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  51bd54d

• Add to Dockerfile

  cansavvy

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  743fb45

• Get rid of umap edit

  cansavvy

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  cff76f6

• Add wgcna example to snakefile and run

  cansavvy

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  4f77862

• Move WGCNA to the "advanced topics" folder

  cansavvy

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  364e175

• remove rna-seq files

  cansavvy

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  58b4550

Commits on Nov 12, 2020

• A set up with ANOVA

  cansavvy

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  ab3df5b

• Use limma instead. Its more straightforward and gives essentially the same results

  cansavvy

  committed
  d16639a